Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_F02
         (878 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   4.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   4.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   5.5  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   5.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.7  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   9.7  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 202 GRDHDRVHEDRRGLYLH 152
           G+D   VH  RRGL LH
Sbjct: 14  GQDKHMVHWFRRGLRLH 30


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 543 RQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNK 439
           ++  K NS +NGS D +      ++    + NG+K
Sbjct: 275 KEKDKPNSTTNGSPDVIKVEPELSDSEKTLCNGSK 309


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 579 LVTPVTSSNW*NRQLSKDNSASNGSGD 499
           L+   T+S+   R  +  NSASN SGD
Sbjct: 330 LLRHYTASSKNYRSATGGNSASNSSGD 356


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 864 EYGDLVSGDVPPQVRSEVGICLGNGSICGFSKN 766
           + G   SG  PP   +E    LG   +C F KN
Sbjct: 270 DLGSPSSGPAPPGDFTENMGTLGYNELCEFHKN 302


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 836 TSPLTKSPYSE 868
           +SPLT+SPY E
Sbjct: 420 SSPLTESPYFE 430


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = +2

Query: 515 EALLSLLSCLFYQFEEVTGVTRSESHTPSLGKVTGKCGSVTVRLIPAPRG 664
           E L+S ++ +  +F+E+  + R  +   ++ K  G C S     +  P G
Sbjct: 27  ETLMSDINLIKEEFDELGRLQRICNGEVAVNKCEGSCKSQVQPSVITPTG 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,446
Number of Sequences: 336
Number of extensions: 4629
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)