Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_E23
         (930 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0284 + 21909758-21913645                                         30   2.3  
11_06_0291 + 22008412-22012284                                         28   9.2  
07_03_1727 + 29068348-29068571,29069473-29069514,29069593-290698...    28   9.2  

>11_06_0284 + 21909758-21913645
          Length = 1295

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +2

Query: 209 RWKLFKKIEKVGRNVRDGLIKAGPAIAVIGQAKIIRKVDFIVKLQ 343
           + K+++K EK+  +++DG  K    + +  Q K + +VD  V LQ
Sbjct: 326 KMKIYEKFEKIKSDIQDGQQKGDKTLLLQLQKKGVHRVDLHVLLQ 370


>11_06_0291 + 22008412-22012284
          Length = 1290

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 13/45 (28%), Positives = 27/45 (60%)
 Frame = +2

Query: 209 RWKLFKKIEKVGRNVRDGLIKAGPAIAVIGQAKIIRKVDFIVKLQ 343
           +  ++KK+EK+  +++DG  K+   + +  Q K + +VD  V +Q
Sbjct: 301 KMNVYKKLEKIKSDIKDGQHKSDKQLLLQLQKKGVDQVDLHVLVQ 345


>07_03_1727 +
           29068348-29068571,29069473-29069514,29069593-29069839,
           29069936-29070013,29070551-29070736,29070829-29071126,
           29071775-29072244
          Length = 514

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +1

Query: 181 RRGQRCSRAQVEALQEN*ESGTQRSRWINQSGSSYSRHRA 300
           +RG++ +RA+ EA +E    GT+R+R + +  +    HRA
Sbjct: 384 KRGEQMARAR-EAAREITPEGTERARVVGEEEAGPEHHRA 422


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,044,212
Number of Sequences: 37544
Number of extensions: 236585
Number of successful extensions: 442
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)