Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_E16
         (891 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   374   e-106
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   360   e-102
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    26   0.40 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   1.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   1.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   4.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   4.9  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   6.5  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    22   8.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   8.6  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  374 bits (919), Expect = e-106
 Identities = 169/196 (86%), Positives = 183/196 (93%)
 Frame = +1

Query: 208 VFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 387
           VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYAPDAE+Y++FA+LFDPIIEDYH GFK
Sbjct: 34  VFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFK 93

Query: 388 KTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSG 567
           KTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLEGYPFNPCLTE+QYKEME+KVS 
Sbjct: 94  KTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFNPCLTEAQYKEMEEKVSS 153

Query: 568 TLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNE 747
           TLS LEGELKGTFYPLTGMSKETQQ+LIDDHFLFKEGDRFLQAANACRFWPTGRGIYHN+
Sbjct: 154 TLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHND 213

Query: 748 NKTFLXVGATRXDHLR 795
           +KTFL V     DHLR
Sbjct: 214 DKTFL-VWCNEEDHLR 228



 Score = 51.6 bits (118), Expect = 9e-09
 Identities = 24/32 (75%), Positives = 27/32 (84%)
 Frame = +3

Query: 108 MVDAATLEKLEAGFSKLQGSDSKSLLKKYLTR 203
           MVD A L+KLE GFSKL  SDSKSLLKKYL++
Sbjct: 1   MVDQAVLDKLETGFSKLSSSDSKSLLKKYLSK 32



 Score = 41.9 bits (94), Expect = 8e-06
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +2

Query: 797 IISMQMGGDLXQVYXXLVTAVNXXEKKI 880
           IISMQMGGDL QVY  LV AVN  EK++
Sbjct: 229 IISMQMGGDLGQVYRRLVHAVNEIEKRL 256


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  360 bits (886), Expect = e-102
 Identities = 161/183 (87%), Positives = 175/183 (95%)
 Frame = +1

Query: 208 VFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 387
           VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYAPDAE+Y++FA+LFDPIIEDYH GFK
Sbjct: 18  VFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFK 77

Query: 388 KTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSG 567
           KTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLEGYPFNPCLTE+QYKEME+KVS 
Sbjct: 78  KTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFNPCLTEAQYKEMEEKVSS 137

Query: 568 TLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNE 747
           TLS LEGELKGTFYPLTGMSKETQQ+LIDDHFLFKEGDRFLQAANA RFWPTGRGIYHN+
Sbjct: 138 TLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFLQAANAXRFWPTGRGIYHND 197

Query: 748 NKT 756
           +KT
Sbjct: 198 DKT 200



 Score = 27.9 bits (59), Expect = 0.13
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 156 LQGSDSKSLLKKYLTR 203
           L  SDSKSLLKKYL++
Sbjct: 1   LSSSDSKSLLKKYLSK 16


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
 Frame = -1

Query: 504 PLERAAAAHAGGDHELAGGVEVAER---VHVSPVLGRVLVGLLEAIVVVLDDRVKQLGEH 334
           P+++ A     GD  L G + V ER   +   PV+ +  V  LEA++  LD    Q    
Sbjct: 106 PVKKEAVVE--GDLVLGGLMMVHERQDRLTCGPVMPQGGVQALEAMLYTLDKLNTQDIVP 163

Query: 333 GVRLGVRRV-DTDAGVQVLDTRLDTVK 256
           GVR+G   + D D     L+  +D +K
Sbjct: 164 GVRIGAHILDDCDNDTYGLEMSVDFIK 190


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 504 VPLQPLPHRVPVQGDGGQGLRHPVQPRGRAQGHVLPPHRHVEGDP 638
           VP   L +R+ V  DG +  ++  QP G  +  +LP  +  EG P
Sbjct: 570 VPSDVLYNRLVVSEDGSETFKYSSQPYGFPERLLLPKGKK-EGMP 613


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 504 VPLQPLPHRVPVQGDGGQGLRHPVQPRGRAQGHVLPPHRHVEGDP 638
           VP   L +R+ V  DG +  ++  QP G  +  +LP  +  EG P
Sbjct: 570 VPSDVLYNRLVVSEDGSETFKYSSQPYGFPERLLLPKGKK-EGMP 613


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -2

Query: 719 GQKRQALAACRKR-SPSLNRKWSSMSCCWV 633
           G K   ++AC     P + +K    +CCWV
Sbjct: 440 GTKDIPISACSLPCEPGMIKKQQGDTCCWV 469


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -2

Query: 719 GQKRQALAACRKR-SPSLNRKWSSMSCCWV 633
           G K   ++AC     P + +K    +CCWV
Sbjct: 530 GTKDIPISACSLPCEPGMIKKQQGDTCCWV 559


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 272 RVSRTWTPASVSTRRTPSRTP 334
           +V   W P  +  RRTP  TP
Sbjct: 352 QVFLNWMPRLLMMRRTPYSTP 372


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 207 SIRQPEEQEDLIRIHPP 257
           S  QP+EQE L  + PP
Sbjct: 34  SAEQPKEQEPLPPVTPP 50


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 85  QVPEKPQQWSTPQPSR 132
           Q P+ PQ+ S P PS+
Sbjct: 29  QSPQAPQRGSPPNPSQ 44


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,082
Number of Sequences: 438
Number of extensions: 4891
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)