BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_E08
(872 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007110-1|AAH07110.2| 310|Homo sapiens C11orf54 protein protein. 114 3e-25
AL136605-1|CAB66540.1| 315|Homo sapiens hypothetical protein pr... 114 3e-25
CR533538-1|CAG38569.1| 315|Homo sapiens PTD012 protein. 112 2e-24
BC012298-1|AAH12298.1| 265|Homo sapiens chromosome 11 open read... 102 2e-21
AK130578-1|BAC85386.1| 241|Homo sapiens protein ( Homo sapiens ... 33 1.0
X63692-1|CAA45219.1| 1616|Homo sapiens DNA (cytosine-5-)-methylt... 32 2.4
BC126227-1|AAI26228.1| 1632|Homo sapiens DNMT1 protein protein. 32 2.4
BC092517-1|AAH92517.1| 1511|Homo sapiens DNMT1 protein protein. 32 2.4
AF180682-1|AAF23609.1| 1280|Homo sapiens DNA (cytosine-5)-methyl... 32 2.4
AB209413-1|BAD92650.1| 1606|Homo sapiens DNA (cytosine-5-)-methy... 32 2.4
BC114965-1|AAI14966.1| 1578|Homo sapiens FERM and PDZ domain con... 32 3.1
AL591470-1|CAI12951.1| 1578|Homo sapiens FERM and PDZ domain con... 32 3.1
AL513165-5|CAI16156.1| 1578|Homo sapiens FERM and PDZ domain con... 32 3.1
AF079564-1|AAC28392.1| 353|Homo sapiens ubiquitin-specific prot... 32 3.1
AB023184-1|BAA76811.1| 1578|Homo sapiens KIAA0967 protein protein. 32 3.1
AF231919-1|AAF72943.1| 2248|Homo sapiens C21orf108 protein. 31 5.5
AB011111-1|BAA25465.2| 2046|Homo sapiens KIAA0539 protein protein. 31 5.5
AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein... 31 7.2
>BC007110-1|AAH07110.2| 310|Homo sapiens C11orf54 protein protein.
Length = 310
Score = 114 bits (275), Expect = 3e-25
Identities = 51/100 (51%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Frame = +3
Query: 576 ALLGNYLLTEGKPGKVIKVVAKNRTGKSNFITSIRETLKTHYGDKVVGLGGAFVLRAGRG 755
ALL N +EG+PGKVI+V AK RTG NF+T +RETL+ HYG+K +G+GG F+++ G+
Sbjct: 150 ALLANLFASEGQPGKVIEVKAKRRTGPLNFVTCMRETLEKHYGNKPIGMGGTFIIQKGKV 209
Query: 756 YFHVMP-DFSRAPLCSDAAVDSWLHYFELDAPLTVVGTLV 872
H+MP +FS PL SD V+ WLH++E+ APL + V
Sbjct: 210 KSHIMPAEFSSCPLNSDEEVNKWLHFYEMKAPLVCLPVFV 249
Score = 93.1 bits (221), Expect = 1e-18
Identities = 42/92 (45%), Positives = 58/92 (63%)
Frame = +2
Query: 164 VLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKLVEIGGPPYLVPQVKRDKIY 343
V+ GL NF V+VSV D PDLT+ P+ G+ G ++ E+GG PYL+P V + K+Y
Sbjct: 14 VMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVY 73
Query: 344 DLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCE 439
DL K+ + + AF+ GAGAGP+ LG N E
Sbjct: 74 DLNKIAKEIKLPGAFILGAGAGPFQTLGFNSE 105
>AL136605-1|CAB66540.1| 315|Homo sapiens hypothetical protein
protein.
Length = 315
Score = 114 bits (275), Expect = 3e-25
Identities = 51/100 (51%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Frame = +3
Query: 576 ALLGNYLLTEGKPGKVIKVVAKNRTGKSNFITSIRETLKTHYGDKVVGLGGAFVLRAGRG 755
ALL N +EG+PGKVI+V AK RTG NF+T +RETL+ HYG+K +G+GG F+++ G+
Sbjct: 155 ALLANLFASEGQPGKVIEVKAKRRTGPLNFVTCMRETLEKHYGNKPIGMGGTFIIQKGKV 214
Query: 756 YFHVMP-DFSRAPLCSDAAVDSWLHYFELDAPLTVVGTLV 872
H+MP +FS PL SD V+ WLH++E+ APL + V
Sbjct: 215 KSHIMPAEFSSCPLNSDEEVNKWLHFYEMKAPLVCLPVFV 254
Score = 102 bits (244), Expect = 2e-21
Identities = 47/106 (44%), Positives = 66/106 (62%)
Frame = +2
Query: 122 EKELYTPPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKLVEIGG 301
E + P L+E+A V+ GL NF V+VSV D PDLT+ P+ G+ G ++ E+GG
Sbjct: 5 EFSFHVPSLEELAGVMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGG 64
Query: 302 PPYLVPQVKRDKIYDLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCE 439
PYL+P V + K+YDL K+ + + AF+ GAGAGP+ LG N E
Sbjct: 65 VPYLLPLVNQKKVYDLNKIAKEIKLPGAFILGAGAGPFQTLGFNSE 110
>CR533538-1|CAG38569.1| 315|Homo sapiens PTD012 protein.
Length = 315
Score = 112 bits (269), Expect = 2e-24
Identities = 50/100 (50%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Frame = +3
Query: 576 ALLGNYLLTEGKPGKVIKVVAKNRTGKSNFITSIRETLKTHYGDKVVGLGGAFVLRAGRG 755
ALL N +EG+PGKVI+V AK RTG N +T +RETL+ HYG+K +G+GG F+++ G+
Sbjct: 155 ALLANLFASEGQPGKVIEVKAKRRTGPLNLVTCMRETLEKHYGNKPIGMGGTFIIQKGKV 214
Query: 756 YFHVMP-DFSRAPLCSDAAVDSWLHYFELDAPLTVVGTLV 872
H+MP +FS PL SD V+ WLH++E+ APL + V
Sbjct: 215 KSHIMPAEFSSCPLNSDEEVNKWLHFYEMKAPLVCLPVFV 254
Score = 102 bits (244), Expect = 2e-21
Identities = 47/106 (44%), Positives = 66/106 (62%)
Frame = +2
Query: 122 EKELYTPPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKLVEIGG 301
E + P L+E+A V+ GL NF V+VSV D PDLT+ P+ G+ G ++ E+GG
Sbjct: 5 EFSFHAPSLEELAGVMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGG 64
Query: 302 PPYLVPQVKRDKIYDLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCE 439
PYL+P V + K+YDL K+ + + AF+ GAGAGP+ LG N E
Sbjct: 65 VPYLLPLVNQKKVYDLNKIAKEIKLPGAFILGAGAGPFQTLGFNSE 110
>BC012298-1|AAH12298.1| 265|Homo sapiens chromosome 11 open reading
frame 54 protein.
Length = 265
Score = 102 bits (244), Expect = 2e-21
Identities = 47/106 (44%), Positives = 66/106 (62%)
Frame = +2
Query: 122 EKELYTPPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKLVEIGG 301
E + P L+E+A V+ GL NF V+VSV D PDLT+ P+ G+ G ++ E+GG
Sbjct: 5 EFSFHVPSLEELAGVMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGG 64
Query: 302 PPYLVPQVKRDKIYDLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCE 439
PYL+P V + K+YDL K+ + + AF+ GAGAGP+ LG N E
Sbjct: 65 VPYLLPLVNQKKVYDLNKIAKEIKLPGAFILGAGAGPFQTLGFNSE 110
Score = 37.9 bits (84), Expect = 0.047
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 774 DFSRAPLCSDAAVDSWLHYFELDAPLTVVGTLV 872
+FS PL SD V+ WLH++E+ APL + V
Sbjct: 172 EFSSCPLNSDEEVNKWLHFYEMKAPLVCLPVFV 204
>AK130578-1|BAC85386.1| 241|Homo sapiens protein ( Homo sapiens
cDNA FLJ27068 fis, clone SPL01475. ).
Length = 241
Score = 33.5 bits (73), Expect = 1.0
Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = -3
Query: 513 LXGCTDTILVPWSTVPLRTLRFTIPSQFTPRYGHGPAPAPARKAGSRFKC----SSSLAR 346
L G + P V L + P Q GHGP P P + G C +SS R
Sbjct: 80 LDGLVCALTAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSLR 139
Query: 345 SYILSRLTC-GTKYGGPPISTSLASPVNP 262
+ R TC G G + T ASP +P
Sbjct: 140 PCLSDRGTCPGAPQGA--VGTCRASPQSP 166
>X63692-1|CAA45219.1| 1616|Homo sapiens DNA
(cytosine-5-)-methyltransferase protein.
Length = 1616
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 95 IDYTKVTIKEKELYTPPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTG 274
+D+ V + Y L E V S G F F+E A S +PP + +SPG G
Sbjct: 1051 VDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKG 1110
Query: 275 DAK 283
K
Sbjct: 1111 KGK 1113
>BC126227-1|AAI26228.1| 1632|Homo sapiens DNMT1 protein protein.
Length = 1632
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 95 IDYTKVTIKEKELYTPPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTG 274
+D+ V + Y L E V S G F F+E A S +PP + +SPG G
Sbjct: 1067 VDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKG 1126
Query: 275 DAK 283
K
Sbjct: 1127 KGK 1129
>BC092517-1|AAH92517.1| 1511|Homo sapiens DNMT1 protein protein.
Length = 1511
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 95 IDYTKVTIKEKELYTPPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTG 274
+D+ V + Y L E V S G F F+E A S +PP + +SPG G
Sbjct: 946 VDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKG 1005
Query: 275 DAK 283
K
Sbjct: 1006 KGK 1008
>AF180682-1|AAF23609.1| 1280|Homo sapiens DNA
(cytosine-5)-methyltransferase protein.
Length = 1280
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 95 IDYTKVTIKEKELYTPPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTG 274
+D+ V + Y L E V S G F F+E A S +PP + +SPG G
Sbjct: 715 VDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKG 774
Query: 275 DAK 283
K
Sbjct: 775 KGK 777
>AB209413-1|BAD92650.1| 1606|Homo sapiens DNA
(cytosine-5-)-methyltransferase 1 variant protein.
Length = 1606
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 95 IDYTKVTIKEKELYTPPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTG 274
+D+ V + Y L E V S G F F+E A S +PP + +SPG G
Sbjct: 1038 VDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKG 1097
Query: 275 DAK 283
K
Sbjct: 1098 KGK 1100
>BC114965-1|AAI14966.1| 1578|Homo sapiens FERM and PDZ domain
containing 1 protein.
Length = 1578
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 482 GTRIVSVHPXRSAQGQQRLPPATAAQRRDQ 571
GT + HP R QGQ R PP Q ++Q
Sbjct: 1169 GTEQIPPHPPRDPQGQSREPPGQGCQAQEQ 1198
>AL591470-1|CAI12951.1| 1578|Homo sapiens FERM and PDZ domain
containing 1 protein.
Length = 1578
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 482 GTRIVSVHPXRSAQGQQRLPPATAAQRRDQ 571
GT + HP R QGQ R PP Q ++Q
Sbjct: 1169 GTEQIPPHPPRDPQGQSREPPGQGCQAQEQ 1198
>AL513165-5|CAI16156.1| 1578|Homo sapiens FERM and PDZ domain
containing 1 protein.
Length = 1578
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 482 GTRIVSVHPXRSAQGQQRLPPATAAQRRDQ 571
GT + HP R QGQ R PP Q ++Q
Sbjct: 1169 GTEQIPPHPPRDPQGQSREPPGQGCQAQEQ 1198
>AF079564-1|AAC28392.1| 353|Homo sapiens ubiquitin-specific
protease UBP41 protein.
Length = 353
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 687 LKTHYGDKVVGLGGAFVLRAGRGYFHVMPDFSRAPLCSDAA--VDSWLHYFELDAPLTVV 860
+ H G + G A+ G G +H D S P+ S D++LH++EL +P + +
Sbjct: 294 VSNHSGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLHFYELASPTSPI 353
>AB023184-1|BAA76811.1| 1578|Homo sapiens KIAA0967 protein protein.
Length = 1578
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 482 GTRIVSVHPXRSAQGQQRLPPATAAQRRDQ 571
GT + HP R QGQ R PP Q ++Q
Sbjct: 1169 GTEQIPPHPPRDPQGQSREPPGQGCQAQEQ 1198
>AF231919-1|AAF72943.1| 2248|Homo sapiens C21orf108 protein.
Length = 2248
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 732 FVLRAGRGYFHVMPDFSRAPLCSDAAVDSWL 824
+ L A RG FH++ F +PLC +AA +W+
Sbjct: 1779 YELCARRGIFHIILSFFHSPLCDEAA-QNWI 1808
>AB011111-1|BAA25465.2| 2046|Homo sapiens KIAA0539 protein protein.
Length = 2046
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 732 FVLRAGRGYFHVMPDFSRAPLCSDAAVDSWL 824
+ L A RG FH++ F +PLC +AA +W+
Sbjct: 1577 YELCARRGIFHIILSFFHSPLCDEAA-QNWI 1606
>AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein 3
protein.
Length = 1386
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 263 GLTGDAKLVEIGGPPYLVPQVKRDKIYDLAKLLEHLNRDPAFLAGAGA 406
G+ LV++ PP L P ++ LA L + R+PAFLAG+GA
Sbjct: 854 GVPSAPVLVQLPSPPDLEPGLEVGA--GLAVRLARVLREPAFLAGSGA 899
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,852,772
Number of Sequences: 237096
Number of extensions: 2795431
Number of successful extensions: 9605
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9593
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -