Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_E08
         (872 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53149-6|AAZ82856.1|  284|Caenorhabditis elegans Hypothetical pr...    94   1e-19
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ...    29   4.3  
Z79597-2|CAB01860.2|  611|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AL132841-7|CAB61033.1|  611|Caenorhabditis elegans Hypothetical ...    28   7.6  

>U53149-6|AAZ82856.1|  284|Caenorhabditis elegans Hypothetical
           protein C24B5.4 protein.
          Length = 284

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 45/125 (36%), Positives = 72/125 (57%)
 Frame = +2

Query: 164 VLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKLVEIGGPPYLVPQVKRDKIY 343
           V    L +NF+ VEV++ D PDL++PP+  KS G   + ++ E+GGP  L P    D  +
Sbjct: 1   VFQTSLLSNFENVEVNIVDCPDLSKPPFNQKSSGFGHNLRIAEVGGPGNLYPGFHIDHQF 60

Query: 344 DLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCEGIVNLSVRNGTVDQGTRIVSVHPXRSAQ 523
           D+ K+ +      A + G GAGPWP +G NCE + +++++ G V  GTRI  ++     +
Sbjct: 61  DIPKIGKVCEHPEAAVFGPGAGPWPIVGQNCEMVADVNLKTGEV--GTRIAEINSNSDKR 118

Query: 524 GQQRL 538
             QR+
Sbjct: 119 YVQRI 123



 Score = 88.2 bits (209), Expect = 7e-18
 Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
 Frame = +3

Query: 561 DETRTALLGNYLLTEG-KPGKVIKVVAKNRTGKSNFITSIRETLKTHYGDKVVGLGGAFV 737
           DE + +L+ N  L++  K   V+   A  R G+ N    IR+ L+ H+G K+V L G F+
Sbjct: 125 DEPKFSLMANLALSDADKSSTVVHFKASVRKGEKNLTNCIRDGLQEHFGKKIVSLAGQFI 184

Query: 738 LRAGRGYFHVMPDFSRAPLCSDAAVDSWLHYFELDAPL 851
           ++ G+   HVMPDF   P  ++A VD WL+YFE+ APL
Sbjct: 185 IQTGKARLHVMPDFPGCPFENNAEVDKWLNYFEMSAPL 222


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -2

Query: 862  PTTVSG-ASSSK*CSQESTAASEHSGAREKSGITWK*PRPARSTNAPPRPTTLSP 701
            P+TVSG ASS    +  ST AS  SG    S      P P++ST+      T SP
Sbjct: 1063 PSTVSGSASSGSTATMGSTEASSTSGGSSTS------PNPSQSTSPSTSGATSSP 1111


>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
           protein H02F09.3 protein.
          Length = 1275

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -2

Query: 871 TSVPTTVSGASSSK*CSQESTAASEHSGAREKSGI 767
           TS P+T+SG+S+S       T AS  SG+ E S I
Sbjct: 625 TSGPSTISGSSASTVTGSTVTEASTISGSTESSTI 659


>Z79597-2|CAB01860.2|  611|Caenorhabditis elegans Hypothetical
           protein C33A11.1 protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = +1

Query: 64  LYKRTYKNDVNRLH*SNNQGEGTIYSSVGRSSLCIVEWFNNELQVCGSVSGR*SR 228
           L K   +ND N  + SNN GE  +Y +V + S+ +VE+    L++  S + R SR
Sbjct: 399 LRKTMNENDDNVFNVSNNFGETPLYVAVLQRSIEVVEYL---LELGASPNSRSSR 450


>AL132841-7|CAB61033.1|  611|Caenorhabditis elegans Hypothetical
           protein C33A11.1 protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = +1

Query: 64  LYKRTYKNDVNRLH*SNNQGEGTIYSSVGRSSLCIVEWFNNELQVCGSVSGR*SR 228
           L K   +ND N  + SNN GE  +Y +V + S+ +VE+    L++  S + R SR
Sbjct: 399 LRKTMNENDDNVFNVSNNFGETPLYVAVLQRSIEVVEYL---LELGASPNSRSSR 450


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,082,623
Number of Sequences: 27780
Number of extensions: 399056
Number of successful extensions: 1203
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)