Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_E07
(858 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1336 + 35773629-35773856,35773931-35774085,35774217-357745... 31 1.6
11_06_0610 - 25449085-25453284 29 3.6
07_01_0378 + 2826421-2826427,2827286-2827375,2827400-2827639,282... 29 3.6
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 29 4.7
04_03_0646 + 18363847-18364858,18365501-18365578,18366161-18366798 29 4.7
01_05_0202 + 19238425-19239272,19239356-19239586,19239688-19239883 29 4.7
11_03_0063 + 9515666-9516656,9517503-9518599 29 6.3
10_08_0226 - 16001958-16002527 29 6.3
09_01_0073 - 1057560-1058043,1058199-1058385,1058754-1059062,105... 29 6.3
02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196 29 6.3
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 28 8.3
05_03_0164 - 9078814-9079908 28 8.3
02_04_0621 - 24502383-24502476,24502532-24504015,24504125-245041... 28 8.3
>02_05_1336 +
35773629-35773856,35773931-35774085,35774217-35774549,
35774615-35774927,35776992-35777168,35777281-35777397,
35777532-35777698,35777800-35778024,35778127-35778448,
35778542-35778786,35778993-35779131,35779212-35779304,
35779509-35779577
Length = 860
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -3
Query: 298 SFSKESIIVLSQSAKDLASPHLFVPSDVXEGVALRIAR*SSNLPRNQK 155
++ +S + + A DL++PHL +PS + +G L SS L N+K
Sbjct: 130 AYDDDSQLEVDFGALDLSTPHLTLPSSIGKGAHLVSRFMSSKLTDNKK 177
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = -1
Query: 369 KTLVP*A*PVSLPRSSLKISLL*PAFPKSPSSFCPKVPKTLPPPICLS 226
K+L P A PVSLP +K SL P P +P S P V K+LPPP +S
Sbjct: 1262 KSLPPPA-PVSLPPPPVK-SL--P--PPAPVSLPPPVVKSLPPPAPVS 1303
>07_01_0378 +
2826421-2826427,2827286-2827375,2827400-2827639,
2827722-2828035,2828604-2828696,2828789-2828977
Length = 310
Score = 29.5 bits (63), Expect = 3.6
Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 3/113 (2%)
Frame = +2
Query: 167 RKITRSAGNPQGDTLXDVTWDKQMGGGKVFGTLGQN---DDGLFGKAGYNREIFNDDRGK 337
R ++ + NP + W + G G +G G N G FG + ++ +
Sbjct: 82 RNLSANVNNPVSRPMPQRPWQQTSGYGNTYGGYGSNMYSSYGGFGNTYGSGGLYGNSMYS 141
Query: 338 LTGQAYGTRVLGPGGDSTNYGGRLDWANKNAQATIDLNRQIGGRSGMTASGSG 496
G YG + G G YGG + + +GG GM G G
Sbjct: 142 SYGGGYGGSLYGGSG---MYGGGMYNSGLGGSYGGYGMGGMGGMGGMGGMGMG 191
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 386 STNYGGRLDWANKNAQATIDLNRQI 460
S+ +GG L W N + ++T+D +RQ+
Sbjct: 960 SSLHGGSLPWKNTDFESTVDFDRQL 984
>04_03_0646 + 18363847-18364858,18365501-18365578,18366161-18366798
Length = 575
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 37 LKILTFGLEER-NLIQLKMNTNLFYIFATTLVCVNAEVYGPSDYAE 171
L+ L EER N +L N +++YI + + C+ + + P+ Y +
Sbjct: 469 LEALNLECEERINEYELSENIDIYYISNSNIECIGLQAFAPNWYRD 514
>01_05_0202 + 19238425-19239272,19239356-19239586,19239688-19239883
Length = 424
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -1
Query: 237 ICLSQVTSXRVSP*GLPADRVIFRVIRRSVNFCVNTHQSCSEDIKQ---ICIHFELYQVS 67
+C+++ S P L +IF VI N ++T SCS ++ I H + Y S
Sbjct: 334 VCITERRSLSTDPLNLSTFNIIFEVISAYGNIGLSTGYSCSRQLQHQEGIACHEKAYNFS 393
>11_03_0063 + 9515666-9516656,9517503-9518599
Length = 695
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 37 LKILTFGLEER-NLIQLKMNTNLFYIFATTLVCVNAEVYGPSDYAE 171
L+ L EER N +L N +++YI + + C+ + + P+ Y +
Sbjct: 485 LEALNLESEERINEYELSENIDIYYISNSNIECIGLQAFAPNWYRD 530
>10_08_0226 - 16001958-16002527
Length = 189
Score = 28.7 bits (61), Expect = 6.3
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Frame = +2
Query: 239 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTGQA-YGTRVLGPGGDSTNYGGRLDW 415
G G G++ Q G G + G + G YGT G + GG
Sbjct: 91 GQGSSSGSVSQGG-GSASAGGGGGGVAGGQAGGVDGSGGYGTGTGSGTGSAAADGGASPT 149
Query: 416 ANK---NAQATIDLNRQIGGRSGMTASGSG 496
++ NA AT D N GG+SG + SG G
Sbjct: 150 SSPPYANANATGDGNGNGGGQSGGSGSGGG 179
>09_01_0073 -
1057560-1058043,1058199-1058385,1058754-1059062,
1059427-1060269,1061572-1062552,1063189-1063516
Length = 1043
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 37 LKILTFGLEER-NLIQLKMNTNLFYIFATTLVCVNAEVYGPSDYAE 171
L+ L EER N +L N +++YI + + C+ + + P+ Y +
Sbjct: 542 LEALNLESEERINEYELSENIDIYYISNSNIECIGLQAFAPNWYRD 587
>02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196
Length = 933
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 37 LKILTFGLEER-NLIQLKMNTNLFYIFATTLVCVNAEVYGPSDYAE 171
L+ L EER N +L N +++YI + + C+ + + P+ Y +
Sbjct: 259 LEALNLESEERINEYELSENIDIYYISNSNIECIGLQAFAPNWYRD 304
>11_06_0143 +
20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 239 GGGKVFG-TLGQNDDGLFGKAGYNREIFNDDRGKLTGQAYGTRVLGPGGDS-TNYGGRLD 412
G G G T+G +DDG K + + + G+ G A G R G GG N+G R D
Sbjct: 177 GAGAAHGKTIGLDDDGEEDKMDEDAKTPSKAAGRGRGGASGGRGRGGGGRGFMNFGERKD 236
Query: 413 WANK 424
+K
Sbjct: 237 PPHK 240
>05_03_0164 - 9078814-9079908
Length = 364
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +2
Query: 365 VLGPGGDSTNYGGRLDWANKNAQATIDLNRQIGGRSGMTASGSGVWDLDKNTHFSAGGMV 544
V+G G +++ LD+ + A A + NR+ G ++ G + L N H S G
Sbjct: 85 VVGDAGATSDGLLLLDFTDIRATARVVANRRAGAQAQAQQQGKKLTGLSFNLHNSRGDTQ 144
Query: 545 SKEFG--HKRPDV 577
+E + PD+
Sbjct: 145 ERELAGVNTNPDI 157
>02_04_0621 -
24502383-24502476,24502532-24504015,24504125-24504177,
24504871-24504984,24505068-24505202,24505960-24506055,
24506692-24506827
Length = 703
Score = 28.3 bits (60), Expect = 8.3
Identities = 25/70 (35%), Positives = 29/70 (41%)
Frame = -1
Query: 345 PVSLPRSSLKISLL*PAFPKSPSSFCPKVPKTLPPPICLSQVTSXRVSP*GLPADRVIFR 166
P S+P S S+ P P+ PS P VP+ LP P SP G P RV F
Sbjct: 9 PKSVPSGSS--SMKPPRPPRGPSFQAPAVPRPLPEP----------SSPGGRPRKRVRFA 56
Query: 165 VIRRSVNFCV 136
S CV
Sbjct: 57 SEASSHQICV 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,175,270
Number of Sequences: 37544
Number of extensions: 488909
Number of successful extensions: 1377
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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