Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_E02
         (871 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41557-3|AAA83304.1|  415|Caenorhabditis elegans Hypothetical pr...   122   3e-28
Z68004-1|CAA91981.1|  435|Caenorhabditis elegans Hypothetical pr...    96   3e-20

>U41557-3|AAA83304.1|  415|Caenorhabditis elegans Hypothetical
           protein C50F7.4 protein.
          Length = 415

 Score =  122 bits (295), Expect = 3e-28
 Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 3/122 (2%)
 Frame = +2

Query: 341 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNAL-SGFKADEYVVKAQILAGGRGKGH 517
           R LNLQE  SK++L K+  S+Q+F +  ++ +       F   EYVVKAQILAGGRGKG 
Sbjct: 18  RFLNLQEFQSKEILEKHGCSVQNFVVASNRKEAEEKWMSFGDHEYVVKAQILAGGRGKGK 77

Query: 518 FDNGFKG--GVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETY 691
           F NG KG  GV +TK +D  ++    MIG +L+TKQT  EG+ V+KVM+AE V+IKRETY
Sbjct: 78  FINGTKGIGGVFITKEKDAALEAIDEMIGKRLVTKQTTSEGVRVDKVMIAEGVDIKRETY 137

Query: 692 FS 697
            +
Sbjct: 138 LA 139



 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 32/71 (45%), Positives = 49/71 (69%)
 Frame = +3

Query: 657 SQKV*ISKERHTLVIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVDIFEGISD 836
           ++ V I +E + L ++M+R  NG  +VASP GGMDIEAVAEKTP  +   P+DI  G+++
Sbjct: 127 AEGVDIKRETY-LAVLMDRESNGPVVVASPDGGMDIEAVAEKTPERIFKTPIDIQMGMTE 185

Query: 837 KVANEIAEFLE 869
             + +IA+ L+
Sbjct: 186 GQSLKIAKDLQ 196


>Z68004-1|CAA91981.1|  435|Caenorhabditis elegans Hypothetical
           protein F47B10.1 protein.
          Length = 435

 Score = 95.9 bits (228), Expect = 3e-20
 Identities = 52/136 (38%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
 Frame = +2

Query: 293 LINLASSTYCPRVISTRHLNLQEHHSKDLLRKYQVSIQDFRII-DSKLDTNALSGFKADE 469
           L+N +     P   + R L L EHH   +L+ Y++ +  F +  D++   +        +
Sbjct: 9   LLNTSQKFMAP---AARTLMLHEHHGMKILQNYEIKVPPFGVAQDAETAFSEAKRIGGKD 65

Query: 470 YVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNK 649
           YVVKAQ+LAGGRGKG F +G +GGV +    D++   A  MIG  LITKQT   G    +
Sbjct: 66  YVVKAQVLAGGRGKGRFSSGLQGGVQIVFTPDEVKQKAGMMIGANLITKQTDHRGKKCEE 125

Query: 650 VMVAESVNIKRETYFS 697
           VMV + +  +RE YFS
Sbjct: 126 VMVCKRLFTRREYYFS 141



 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 21/61 (34%), Positives = 39/61 (63%)
 Frame = +3

Query: 675 SKERHTLVIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVDIFEGISDKVANEI 854
           ++  +   I ++R+ NG  ++AS  GG++IE VA   P  +  +P+D+  GI+ ++A+EI
Sbjct: 134 TRREYYFSITLDRNTNGPIVIASSQGGVNIEEVAATNPDAIVKMPIDVNVGITKELAHEI 193

Query: 855 A 857
           A
Sbjct: 194 A 194


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,901,146
Number of Sequences: 27780
Number of extensions: 331312
Number of successful extensions: 723
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)