Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_D18
         (931 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0492 - 9866492-9866848                                           29   4.0  
04_04_1094 - 30832987-30833316,30833530-30834273,30834484-308347...    29   5.3  
04_03_0070 + 10677677-10679989                                         29   7.0  
03_01_0453 - 3471656-3471819,3472416-3472580,3473062-3473145,347...    28   9.2  

>09_02_0492 - 9866492-9866848
          Length = 118

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 105 CFLLFGDCQCPPSEVFRSNTAPTTYIIKTPTRFTNYTLTALRYGTPRAL 251
           C  LFG      +  F +  AP+T  ++ P R T  T TA+    PR L
Sbjct: 51  CVALFGAIASSIARRFTAAVAPSTSTVRQPPRKTG-TTTAIAAAMPRTL 98


>04_04_1094 -
           30832987-30833316,30833530-30834273,30834484-30834742,
           30834821-30835041,30835127-30835375,30835460-30835595,
           30835864-30836207,30836589-30836758,30837080-30837185,
           30837267-30837330,30838462-30838616
          Length = 925

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +3

Query: 63  VSGSRHVEMKSAFICFLLFGDCQCPPSEVFRSNTAPTTYIIKT 191
           + GSR+V +K A   F+L  D Q   +EV     AP+T    T
Sbjct: 852 IEGSRYVPVKPAPSGFILLQDMQPTEAEVLALTDAPSTVAATT 894


>04_03_0070 + 10677677-10679989
          Length = 770

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 26/89 (29%), Positives = 38/89 (42%)
 Frame = -3

Query: 308 AELYPVLKPAPSTGLPQWCKSSWRPIS*RCQCVVCKTRWCLYYIRSRSGIASKHLGGGAL 129
           A L PVL P P +G+P        P + R +CV+C      +   + S  AS+HL  GA 
Sbjct: 58  AHLEPVLVPPPGSGVP--------PKAARLRCVLCA---ATFSASNPSRTASEHLKRGAC 106

Query: 128 AIAKKQETNKSTLHFDVTTTGHDLTRPKS 42
                Q+   +  H  +T +      P S
Sbjct: 107 PNFAAQQGAAAQPHQAMTVSAASSVVPIS 135


>03_01_0453 -
           3471656-3471819,3472416-3472580,3473062-3473145,
           3473304-3473375,3473496-3473574,3473894-3473990,
           3474064-3474116,3474257-3474386,3474464-3474498,
           3476108-3476212,3476759-3476833,3477671-3477799,
           3477918-3478097,3478737-3478820,3478943-3479059,
           3479170-3479242,3479316-3479437,3479519-3479641,
           3479917-3479989,3480218-3480396,3480699-3480837,
           3481105-3481259,3481570-3481875
          Length = 912

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 513 DYLSFAKWKPLMRLTICTV 569
           D  SF  W+PL+ L ICTV
Sbjct: 124 DCYSFLNWEPLVLLVICTV 142


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,752,537
Number of Sequences: 37544
Number of extensions: 519443
Number of successful extensions: 1200
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)