Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_D16
(918 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 33 0.38
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 32 0.66
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 29 4.7
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 29 4.7
Z98851-3|CAB11538.2| 659|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical pr... 29 6.2
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 28 8.1
U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helical... 28 8.1
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 28 8.1
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 28 8.1
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 32.7 bits (71), Expect = 0.38
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +3
Query: 504 PKTKPARKSPGSLPPCWKTTE--FTSRSCPPRTNST 605
PKT+P P ++P CW+ F PPR N+T
Sbjct: 418 PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNT 453
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 194 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 307
LYM +G+Y+ A KC +Y K+ G+ EA++ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 248 EYLKEKKGEVIKEA-VKRLIENGKRNTMDFAYQLWTKDGKEIVKSY--FPIQFRVIFTEQ 418
EY + E + VK ++ K+N +D WT+ E +KSY F + R FTE
Sbjct: 187 EYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRPKYEDIKSYSSFIQELRSAFTE- 245
Query: 419 TVKLINKRDHHALKLI 466
K N+++ + + LI
Sbjct: 246 LQKRWNRKNEYIISLI 261
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -1
Query: 285 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVGVRMPAHT 130
++I P SFRY+ L ++ SPM ++ S S S+ V V H+
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHS 127
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -1
Query: 285 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVGVRMPAHT 130
++I P SFRY+ L ++ SPM ++ S S S+ V V H+
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHS 127
>Z98851-3|CAB11538.2| 659|Caenorhabditis elegans Hypothetical
protein H12I19.4 protein.
Length = 659
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 152 PTLAPRTDDVLAEQLYMSVVIGEYETAIAKCSE 250
PT PRT ++ E L M I YE KC E
Sbjct: 374 PTYIPRTQKIVEENLAMLPFISAYEPRKDKCVE 406
>Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical
protein F25H5.7 protein.
Length = 490
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 140 GILTPTLAPRTDDVLAEQL-YMSVVIGEYETAIAKCSEYLKEKKGEVIK 283
G L TL+ + E++ Y+ ++ +E + KC+ Y EK GEV+K
Sbjct: 250 GPLPETLSDFWHMIYQEKIAYVLMLCTLFEGGVEKCALYYPEKLGEVVK 298
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 140 GILTPTLAPRTDDVLAEQL-YMSVVIGEYETAIAKCSEYLKEKKGEVIK 283
G L TL+ + E++ Y+ ++ +E + KC+ Y EK GEV+K
Sbjct: 251 GPLPETLSDFWHMIYQEKIAYVLMLCTLFEGGVEKCALYYPEKLGEVVK 299
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 272 EVIKEAVKRLIENGKRNTMDFAYQLWTKDG 361
+V+K ++ L +NT+D A Q+W K+G
Sbjct: 242 DVVKTRMQGLEAKKYKNTLDCAMQIWKKEG 271
>U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform b
protein.
Length = 1250
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +2
Query: 401 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 556
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 557 NNRVYFKIMSTEDK 598
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +2
Query: 401 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 556
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 557 NNRVYFKIMSTEDK 598
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +2
Query: 188 EQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 367
E+ Y ++GE E + KC +K++ G ++++IE + + F +TK+ +
Sbjct: 440 EEKYQHEILGEMEGQVLKC---VKDQNG---NHVIQKVIERVEPERLQFIIDAFTKNNSD 493
Query: 368 IV--KSYFPIQFRVI 406
V S P RVI
Sbjct: 494 NVYTLSVHPYGCRVI 508
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,042,761
Number of Sequences: 27780
Number of extensions: 341627
Number of successful extensions: 1285
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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