Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_D12
         (897 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73906-6|CAA98113.1|  824|Caenorhabditis elegans Hypothetical pr...    52   6e-07
U50068-5|AAB37734.1|  722|Caenorhabditis elegans Temporarily ass...    38   0.013
Z81513-10|CAB04183.1|  247|Caenorhabditis elegans Hypothetical p...    29   3.4  
Z81044-12|CAB02811.2|  527|Caenorhabditis elegans Hypothetical p...    29   6.0  
Z81513-11|CAB04184.2|  254|Caenorhabditis elegans Hypothetical p...    28   7.9  
Z75550-13|CAA99922.2|  111|Caenorhabditis elegans Hypothetical p...    28   7.9  

>Z73906-6|CAA98113.1|  824|Caenorhabditis elegans Hypothetical
           protein D2030.6 protein.
          Length = 824

 Score = 52.0 bits (119), Expect = 6e-07
 Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
 Frame = +2

Query: 581 SKKGTSGTPLDLLANYFTVETTPK-WGLYQYHVDISPEEDSTGVRKALMRVHSKT--LG- 748
           SK G+SG P    AN+  +E T   + +YQYHV+  P  DS   R+ ++R ++ T  +G 
Sbjct: 41  SKTGSSGQPQKCFANFIPIEMTQSDYSIYQYHVEFEPTVDSKANREKMLRDNNVTDEIGH 100

Query: 749 GYLFDGTVLY 778
            ++FDG +LY
Sbjct: 101 HFVFDGMILY 110


>U50068-5|AAB37734.1|  722|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 292 protein.
          Length = 722

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +2

Query: 653 WGLYQYHVDISPEEDSTGVRKALMRVHSKTL---GGYLFDGTVLY 778
           + +YQYHV+  P  DS   R+ ++R  S T+     ++FDG +LY
Sbjct: 6   YSIYQYHVEFEPTVDSKATRENMLRQPSVTVEIGKHFVFDGMILY 50


>Z81513-10|CAB04183.1|  247|Caenorhabditis elegans Hypothetical
           protein F26D2.13 protein.
          Length = 247

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
 Frame = +1

Query: 289 TSTSIWLGTTIQCSSSKSWCPDTNSTSGSRLTPCY---SHYT*TSRRYRCATT 438
           +STS  + +T   SS  S+ PD++S+  S     +   + YT   RR  CATT
Sbjct: 191 SSTSTLISSTAISSSCTSYIPDSSSSCASWAANGFCTNNFYTIAGRRAVCATT 243


>Z81044-12|CAB02811.2|  527|Caenorhabditis elegans Hypothetical
           protein C30H6.5 protein.
          Length = 527

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 779 CTTQCHQRDILRVFYCEHASVPFGLQCCLL 690
           C  QC Q   L+ FYC   +  FGL+ C+L
Sbjct: 345 CMRQCAQS--LQNFYCASINYSFGLKICIL 372


>Z81513-11|CAB04184.2|  254|Caenorhabditis elegans Hypothetical
           protein F26D2.14 protein.
          Length = 254

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +1

Query: 289 TSTSIWLGTTIQCSSSKSWCPDTNSTSGSRLTPCY---SHYT*TSRRYRCATT 438
           TS  I   TT   S+  S+ PD++S+  +     +   +HYT   R+  CATT
Sbjct: 198 TSARISSSTTSITSTCSSYNPDSSSSCAAWAANGFCTNTHYTVARRKATCATT 250


>Z75550-13|CAA99922.2|  111|Caenorhabditis elegans Hypothetical
           protein T22C1.4 protein.
          Length = 111

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 632 TVETTPKWGLYQYHVDISPEEDSTGVRKAL 721
           T+E TP+W   + H  ISP++D +   K L
Sbjct: 8   TLEGTPEWMAIELHGAISPQDDGSFDSKTL 37


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,365,431
Number of Sequences: 27780
Number of extensions: 379850
Number of successful extensions: 1085
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)