Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_D10
(987 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101847-1|AAI01848.1| 196|Homo sapiens peptidoglycan recogniti... 43 0.002
BC101845-1|AAI01846.1| 196|Homo sapiens peptidoglycan recogniti... 43 0.002
BC096157-1|AAH96157.1| 196|Homo sapiens peptidoglycan recogniti... 43 0.002
BC096156-1|AAH96156.1| 196|Homo sapiens peptidoglycan recogniti... 43 0.002
BC096155-1|AAH96155.1| 196|Homo sapiens peptidoglycan recogniti... 43 0.002
BC096154-1|AAH96154.1| 196|Homo sapiens peptidoglycan recogniti... 43 0.002
AY358936-1|AAQ89295.1| 196|Homo sapiens Granulocyte pep A protein. 43 0.002
AF242517-1|AAF99598.1| 196|Homo sapiens hypothetical protein SB... 43 0.002
AF076483-1|AAC31822.1| 196|Homo sapiens peptidoglycan recogniti... 43 0.002
AC007785-2|AAD38243.1| 196|Homo sapiens peptidoglycan recogniti... 43 0.002
AY358156-1|AAQ88523.1| 576|Homo sapiens AQGV3103 protein. 42 0.003
AK055882-1|BAB71034.1| 634|Homo sapiens protein ( Homo sapiens ... 42 0.003
AF384856-1|AAL05629.1| 576|Homo sapiens peptidoglycan recogniti... 42 0.003
AB073610-1|BAD38647.1| 576|Homo sapiens peptidoglycan recogniti... 42 0.003
>BC101847-1|AAI01848.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 43.2 bits (97), Expect = 0.002
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 305 CNTTTQCXTDMXSMQKYH-NALRWXXXXXXXXXXXXXXAYEGRGWNVIGIHAG 460
CNT C ++Q YH L W YEGRGWN G H+G
Sbjct: 67 CNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSG 119
>BC101845-1|AAI01846.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 43.2 bits (97), Expect = 0.002
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 305 CNTTTQCXTDMXSMQKYH-NALRWXXXXXXXXXXXXXXAYEGRGWNVIGIHAG 460
CNT C ++Q YH L W YEGRGWN G H+G
Sbjct: 67 CNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSG 119
>BC096157-1|AAH96157.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 43.2 bits (97), Expect = 0.002
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 305 CNTTTQCXTDMXSMQKYH-NALRWXXXXXXXXXXXXXXAYEGRGWNVIGIHAG 460
CNT C ++Q YH L W YEGRGWN G H+G
Sbjct: 67 CNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSG 119
>BC096156-1|AAH96156.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 43.2 bits (97), Expect = 0.002
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 305 CNTTTQCXTDMXSMQKYH-NALRWXXXXXXXXXXXXXXAYEGRGWNVIGIHAG 460
CNT C ++Q YH L W YEGRGWN G H+G
Sbjct: 67 CNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSG 119
>BC096155-1|AAH96155.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 43.2 bits (97), Expect = 0.002
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 305 CNTTTQCXTDMXSMQKYH-NALRWXXXXXXXXXXXXXXAYEGRGWNVIGIHAG 460
CNT C ++Q YH L W YEGRGWN G H+G
Sbjct: 67 CNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSG 119
>BC096154-1|AAH96154.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 43.2 bits (97), Expect = 0.002
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 305 CNTTTQCXTDMXSMQKYH-NALRWXXXXXXXXXXXXXXAYEGRGWNVIGIHAG 460
CNT C ++Q YH L W YEGRGWN G H+G
Sbjct: 67 CNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSG 119
>AY358936-1|AAQ89295.1| 196|Homo sapiens Granulocyte pep A protein.
Length = 196
Score = 43.2 bits (97), Expect = 0.002
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 305 CNTTTQCXTDMXSMQKYH-NALRWXXXXXXXXXXXXXXAYEGRGWNVIGIHAG 460
CNT C ++Q YH L W YEGRGWN G H+G
Sbjct: 67 CNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSG 119
>AF242517-1|AAF99598.1| 196|Homo sapiens hypothetical protein
SBBI68 protein.
Length = 196
Score = 43.2 bits (97), Expect = 0.002
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 305 CNTTTQCXTDMXSMQKYH-NALRWXXXXXXXXXXXXXXAYEGRGWNVIGIHAG 460
CNT C ++Q YH L W YEGRGWN G H+G
Sbjct: 67 CNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSG 119
>AF076483-1|AAC31822.1| 196|Homo sapiens peptidoglycan recognition
protein precursor protein.
Length = 196
Score = 43.2 bits (97), Expect = 0.002
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 305 CNTTTQCXTDMXSMQKYH-NALRWXXXXXXXXXXXXXXAYEGRGWNVIGIHAG 460
CNT C ++Q YH L W YEGRGWN G H+G
Sbjct: 67 CNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSG 119
>AC007785-2|AAD38243.1| 196|Homo sapiens peptidoglycan recognition
protein precursor protein.
Length = 196
Score = 43.2 bits (97), Expect = 0.002
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 305 CNTTTQCXTDMXSMQKYH-NALRWXXXXXXXXXXXXXXAYEGRGWNVIGIHAG 460
CNT C ++Q YH L W YEGRGWN G H+G
Sbjct: 67 CNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSG 119
>AY358156-1|AAQ88523.1| 576|Homo sapiens AQGV3103 protein.
Length = 576
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 305 CNTTTQCXTDMXSMQKYHNALR-WXXXXXXXXXXXXXXAYEGRGWNVIGIH 454
C T+C +M SMQ+YH + W YEGRGW+ +G H
Sbjct: 419 CTDFTRCAANMRSMQRYHQDTQGWGDIGYSFVVGSDGYVYEGRGWHWVGAH 469
>AK055882-1|BAB71034.1| 634|Homo sapiens protein ( Homo sapiens
cDNA FLJ31320 fis, clone LIVER1000542, moderately
similar to Mus musculus TAGL-alpha mRNA. ).
Length = 634
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 305 CNTTTQCXTDMXSMQKYHNALR-WXXXXXXXXXXXXXXAYEGRGWNVIGIH 454
C T+C +M SMQ+YH + W YEGRGW+ +G H
Sbjct: 419 CTDFTRCAANMRSMQRYHQDTQGWGDIGYGFVVGSDGYVYEGRGWHWVGAH 469
>AF384856-1|AAL05629.1| 576|Homo sapiens peptidoglycan recognition
protein L precursor protein.
Length = 576
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 305 CNTTTQCXTDMXSMQKYHNALR-WXXXXXXXXXXXXXXAYEGRGWNVIGIH 454
C T+C +M SMQ+YH + W YEGRGW+ +G H
Sbjct: 419 CTDFTRCAANMRSMQRYHQDTQGWGDIGYSFVVGSDGYVYEGRGWHWVGAH 469
>AB073610-1|BAD38647.1| 576|Homo sapiens peptidoglycan recognition
protein L precursor protein.
Length = 576
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 305 CNTTTQCXTDMXSMQKYHNALR-WXXXXXXXXXXXXXXAYEGRGWNVIGIH 454
C T+C +M SMQ+YH + W YEGRGW+ +G H
Sbjct: 419 CTDFTRCAANMRSMQRYHQDTQGWGDIGYSFVVGSDGYVYEGRGWHWVGAH 469
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,186,185
Number of Sequences: 237096
Number of extensions: 1434097
Number of successful extensions: 1951
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1937
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13213860436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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