Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_C18
         (938 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040646-1|AAK31537.1|  530|Caenorhabditis elegans Collagen prot...    31   0.90 
AC024805-16|AAK39336.1|  448|Caenorhabditis elegans Hypothetical...    31   0.90 
AF535160-1|AAN33048.1|  468|Caenorhabditis elegans UNC-34 protein.     29   4.8  
AC025722-6|AAO12398.1|  310|Caenorhabditis elegans Uncoordinated...    29   4.8  
AC025722-5|AAO12397.1|  454|Caenorhabditis elegans Uncoordinated...    29   4.8  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    28   8.4  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    28   8.4  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    28   8.4  

>AF040646-1|AAK31537.1|  530|Caenorhabditis elegans Collagen protein
           70 protein.
          Length = 530

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +2

Query: 803 PXGXPGXPXPIPXPXGGFSXXRVXXAVPPPKPW 901
           P G PG   P   P G  S  R      PP PW
Sbjct: 221 PGGRPGSTPPATFPPGSVSTVRYTPGPTPPAPW 253


>AC024805-16|AAK39336.1|  448|Caenorhabditis elegans Hypothetical
           protein Y51H7C.1 protein.
          Length = 448

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +2

Query: 803 PXGXPGXPXPIPXPXGGFSXXRVXXAVPPPKPW 901
           P G PG   P   P G  S  R      PP PW
Sbjct: 144 PGGRPGSTPPATFPPGSISTVRYTPGPTPPGPW 176


>AF535160-1|AAN33048.1|  468|Caenorhabditis elegans UNC-34 protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
 Frame = +2

Query: 815 PGXPXPIPXPXGGFSXXRVXXAVPPP--KPWGXGXXNPPFXXP 937
           P  P   P P GG +      A PPP   P G G   PP   P
Sbjct: 212 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 254


>AC025722-6|AAO12398.1|  310|Caenorhabditis elegans Uncoordinated
           protein 34, isoform b protein.
          Length = 310

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
 Frame = +2

Query: 815 PGXPXPIPXPXGGFSXXRVXXAVPPP--KPWGXGXXNPPFXXP 937
           P  P   P P GG +      A PPP   P G G   PP   P
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 240


>AC025722-5|AAO12397.1|  454|Caenorhabditis elegans Uncoordinated
           protein 34, isoform a protein.
          Length = 454

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
 Frame = +2

Query: 815 PGXPXPIPXPXGGFSXXRVXXAVPPP--KPWGXGXXNPPFXXP 937
           P  P   P P GG +      A PPP   P G G   PP   P
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 240


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
 Frame = +2

Query: 803 PXGXP---GXPXPIPXPXGGFSXXRVXXAVPPPKPWGXGXXNPP 925
           P G P   G P P P P GG          PPP P G     PP
Sbjct: 732 PGGLPPITGGPPP-PPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
 Frame = +2

Query: 803 PXGXP---GXPXPIPXPXGGFSXXRVXXAVPPPKPWGXGXXNPP 925
           P G P   G P P P P GG          PPP P G     PP
Sbjct: 732 PGGLPPITGGPPP-PPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
 Frame = +2

Query: 803 PXGXP---GXPXPIPXPXGGFSXXRVXXAVPPPKPWGXGXXNPP 925
           P G P   G P P P P GG          PPP P G     PP
Sbjct: 315 PGGLPPITGGPPP-PPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,646,469
Number of Sequences: 27780
Number of extensions: 183866
Number of successful extensions: 485
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)