Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_C10
         (891 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.6  
11_06_0012 + 19251085-19251666                                         29   6.6  
10_06_0154 - 11291630-11292106,11292192-11292457,11293027-112931...    29   6.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  
06_03_0218 + 18219956-18220555                                         28   8.7  
05_04_0142 - 18372751-18373338                                         28   8.7  
03_06_0149 - 31987183-31987630,31987813-31987874                       28   8.7  
03_04_0061 - 16949038-16950006                                         28   8.7  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +3

Query: 522 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 680
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>11_06_0012 + 19251085-19251666
          Length = 193

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -3

Query: 769 RTTYTRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKRLVS 614
           RTT T  E   A   R+RH  RR+ GG   G R  R      G+  G  +V+
Sbjct: 69  RTTATAVEAQQA-LRRRRHGGRRDSGGGAGG-RGSRGGVGDLGSCGGTAIVA 118


>10_06_0154 -
           11291630-11292106,11292192-11292457,11293027-11293131,
           11293210-11293234,11293349-11293465,11293528-11294041,
           11295524-11295578,11295980-11296060,11296129-11296219,
           11296321-11296417,11297465-11297529,11297950-11298108,
           11298208-11298455,11300667-11300835
          Length = 822

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 188 ITNFTNKAFFSLHSSCGLSKHHQCILSCLDPINPXLKGDPR 66
           +T+F NK   S+  S   ++H+ C L CL+     +  +PR
Sbjct: 296 LTDFNNKYGPSIRQSVETAEHNNCALRCLNNYLELMIEEPR 336


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 302 NESAN---ARGEAVCVLGALPLPRSLTRCAR 385
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -3

Query: 709 SRREKGGQVSG--KRQGRNRRAHEGASRGKRLVS 614
           +RRE+  + +G  KR+GR R    G  RGKR  S
Sbjct: 106 ARRERRLEAAGAEKREGRRRGGSSGGLRGKRRAS 139


>05_04_0142 - 18372751-18373338
          Length = 195

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = -3

Query: 778 SXERTTYTRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SC 602
           S   ++Y  T      +   R     E+GG   G++QGR R+A   A R +RL +  +C
Sbjct: 39  SAASSSYPSTSGSAGSSSSGRRVEEEEQGGGGGGRKQGRRRKAVARAIR-ERLPAAVAC 96


>03_06_0149 - 31987183-31987630,31987813-31987874
          Length = 169

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 730 AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRG 629
           A+ + H   R +   +  +R+GR R AHEG   G
Sbjct: 76  AVARGHGLERLQEAGIEAERRGRRRNAHEGIKIG 109


>03_04_0061 - 16949038-16950006
          Length = 322

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 604 RTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGA 720
           RT+K PG+   ++PRA+  + P  Y   VR +   +R A
Sbjct: 255 RTMKGPGLGGARVPRAVFRASPRRYYAAVRTARKARRSA 293


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,949,201
Number of Sequences: 37544
Number of extensions: 546334
Number of successful extensions: 1860
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1860
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)