Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_C07
         (896 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical pr...    33   0.28 
U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450...    32   0.64 
Z75711-5|CAB00036.1|  423|Caenorhabditis elegans Hypothetical pr...    31   0.85 
Z27079-12|CAD44154.1|   92|Caenorhabditis elegans Hypothetical p...    29   6.0  
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p...    28   7.9  
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr...    28   7.9  

>Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical
           protein ZC116.1 protein.
          Length = 178

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +2

Query: 104 LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP 193
           L LC LLA  SA   YY  S + PY++Y P
Sbjct: 5   LALCSLLAVASAQYLYYPTSYYTPYYYYYP 34


>U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450
           family protein 14A5 protein.
          Length = 492

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -1

Query: 545 AFASAGR*FSTRLSRKPSCLRNSHPREGSVFSSND 441
           AF + G  F  R  R P  L   HP  G VFSS D
Sbjct: 82  AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116


>Z75711-5|CAB00036.1|  423|Caenorhabditis elegans Hypothetical
           protein K02B12.7 protein.
          Length = 423

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +2

Query: 425 ANSAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLK-QKQPEDSKRPVAEPTETTTST 601
           + + FN +LK  NLP    +EG      + LK T P++ +K+ E S +PV +  E  T+ 
Sbjct: 310 SQNEFNDWLKQSNLPRG-TTEGGDHLSNEELKPTEPVETKKKKERSVKPV-QSKEKVTAE 367

Query: 602 NVSREEMEFT 631
           NV  ++   T
Sbjct: 368 NVEDDDSSST 377


>Z27079-12|CAD44154.1|   92|Caenorhabditis elegans Hypothetical
           protein T05G5.12 protein.
          Length = 92

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 16/61 (26%), Positives = 29/61 (47%)
 Frame = +2

Query: 431 SAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTTSTNVS 610
           S F  Y K+++   D   + ++ Y+K     T P+ QK  + S    A    T ++T+ S
Sbjct: 5   SQFTAYKKVESDEQDSEKQNTFNYQKLSESETMPVHQKTRKGSNHSNASTASTCSTTSSS 64

Query: 611 R 613
           +
Sbjct: 65  K 65


>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
            protein 44, isoform f protein.
          Length = 6994

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 548  PEDSKRPVAEPTETTTSTNVSREEMEFTTESHV 646
            P DS++ +    ETTT+T V+RE  +  +ES V
Sbjct: 3369 PADSEKSLPHVVETTTTTTVTREFDKNDSESPV 3401


>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
            protein.
          Length = 6994

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 548  PEDSKRPVAEPTETTTSTNVSREEMEFTTESHV 646
            P DS++ +    ETTT+T V+RE  +  +ES V
Sbjct: 3369 PADSEKSLPHVVETTTTTTVTREFDKNDSESPV 3401


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,260,879
Number of Sequences: 27780
Number of extensions: 322843
Number of successful extensions: 983
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)