Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_C05
(951 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 39 0.006
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 39 0.006
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 37 0.018
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 27 0.38
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 0.39
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 0.39
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 0.40
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 33 0.40
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 26 1.5
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 31 1.6
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 25 1.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.1
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 27 2.7
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 27 2.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 27 2.8
AF067219-2|AAC17035.1| 74|Caenorhabditis elegans Hypothetical ... 29 3.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 27 4.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 27 4.4
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 4.9
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 4.9
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 4.9
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 26 5.1
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 24 5.3
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 24 5.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical pr... 28 8.5
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -2
Query: 695 GGXGGGXKXXXXXXXXGGGXXXFXXXXHPPPPPPPPXXXKKKXKXXGG 552
GG GGG GGG PPPPPPPP GG
Sbjct: 275 GGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGG 322
Score = 35.1 bits (77), Expect = 0.074
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -3
Query: 697 GGGGGGXKKXXXSXXXXGGXXXXFXXXXTPPPPPPP 590
GGGGGG + GG PPPPPPP
Sbjct: 275 GGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPP 310
Score = 34.7 bits (76), Expect = 0.098
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -2
Query: 695 GGXGGGXKXXXXXXXXGGGXXXFXXXXHPPPPPPPPXXXKKKXKXXGG 552
GG GGG GG PPPPPPPP GG
Sbjct: 274 GGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGG 321
Score = 34.7 bits (76), Expect = 0.098
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 697 GGGGGGXKKXXXSXXXXGGXXXXFXXXXTPPPPPPP 590
GGGGGG GG PPPPPPP
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPP 311
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -3
Query: 703 WXGGGGGGXKKXXXSXXXXGGXXXXFXXXXTPPPPPPP 590
+ GGGGGG GG PPPPPPP
Sbjct: 272 YAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPP 309
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -2
Query: 695 GGXGGGXKXXXXXXXXGGGXXXFXXXXHPPPPPPPPXXXKKKXKXXGG 552
GG GGG GGG PPPPPPPP GG
Sbjct: 275 GGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGG 322
Score = 35.1 bits (77), Expect = 0.074
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -3
Query: 697 GGGGGGXKKXXXSXXXXGGXXXXFXXXXTPPPPPPP 590
GGGGGG + GG PPPPPPP
Sbjct: 275 GGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPP 310
Score = 34.7 bits (76), Expect = 0.098
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -2
Query: 695 GGXGGGXKXXXXXXXXGGGXXXFXXXXHPPPPPPPPXXXKKKXKXXGG 552
GG GGG GG PPPPPPPP GG
Sbjct: 274 GGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGG 321
Score = 34.7 bits (76), Expect = 0.098
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 697 GGGGGGXKKXXXSXXXXGGXXXXFXXXXTPPPPPPP 590
GGGGGG GG PPPPPPP
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPP 311
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -3
Query: 703 WXGGGGGGXKKXXXSXXXXGGXXXXFXXXXTPPPPPPP 590
+ GGGGGG GG PPPPPPP
Sbjct: 272 YAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPP 309
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 37.1 bits (82), Expect = 0.018
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +3
Query: 570 FFFXXXXGGGGGGGVXXXXKXXXXPPXXXXXXXXFXXPPPPPP 698
F F GGGGGGG PP PPPPPP
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPPP 60
Score = 36.7 bits (81), Expect = 0.024
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +2
Query: 575 FXXPXGGGGGGGGXXXXKXXXXPPPGXXXXXXFFXPPPXPPXP 703
F P GGGGGGG PP PPP PP P
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPPP 60
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 707 FXXXGGXGGGXKXXXXXXXXGGGXXXFXXXXHPPPPPPPP 588
F GG GGG PPPPPPPP
Sbjct: 20 FPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPP 59
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 26.6 bits (56), Expect(2) = 0.38
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 611 PPPPPPPP 588
PPPPPPPP
Sbjct: 1339 PPPPPPPP 1346
Score = 24.6 bits (51), Expect(2) = 0.38
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 608 PPPPPPPXXXKK 573
PPPPPPP K
Sbjct: 1356 PPPPPPPPTMSK 1367
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 878 PPPPPXXXXXXGGXKKNPPPXXXP 949
PPPPP GG PPP P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLP 736
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 883 PPPXXKXXXGGXKKKPPPXPXP 948
PPP GG K PPP P P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPP 790
Score = 27.1 bits (57), Expect(2) = 0.39
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 878 PPPPPXXXXXXGGXKKNPPP 937
PPPPP GG PPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPPP 790
Score = 24.2 bits (50), Expect(2) = 0.39
Identities = 14/44 (31%), Positives = 14/44 (31%), Gaps = 3/44 (6%)
Frame = +2
Query: 641 PPPGXXXXXXFFXPPPXPP---XPXKXXXXXXXXXXGGXXXXPP 763
PPPG PPP PP P GG PP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 878 PPPPPXXXXXXGGXKKNPPPXXXP 949
PPPPP GG PPP P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLP 736
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 883 PPPXXKXXXGGXKKKPPPXPXP 948
PPP GG K PPP P P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPP 790
Score = 27.1 bits (57), Expect(2) = 0.39
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 878 PPPPPXXXXXXGGXKKNPPP 937
PPPPP GG PPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPPP 790
Score = 24.2 bits (50), Expect(2) = 0.39
Identities = 14/44 (31%), Positives = 14/44 (31%), Gaps = 3/44 (6%)
Frame = +2
Query: 641 PPPGXXXXXXFFXPPPXPP---XPXKXXXXXXXXXXGGXXXXPP 763
PPPG PPP PP P GG PP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 878 PPPPPXXXXXXGGXKKNPPPXXXP 949
PPPPP GG PPP P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLP 319
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 883 PPPXXKXXXGGXKKKPPPXPXP 948
PPP GG K PPP P P
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPP 373
Score = 27.1 bits (57), Expect(2) = 0.40
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 878 PPPPPXXXXXXGGXKKNPPP 937
PPPPP GG PPP
Sbjct: 354 PPPPPPPGGFKGGPPPPPPP 373
Score = 24.2 bits (50), Expect(2) = 0.40
Identities = 14/44 (31%), Positives = 14/44 (31%), Gaps = 3/44 (6%)
Frame = +2
Query: 641 PPPGXXXXXXFFXPPPXPP---XPXKXXXXXXXXXXGGXXXXPP 763
PPPG PPP PP P GG PP
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = -2
Query: 695 GGXGGGXKXXXXXXXXGGGXXXFXXXXH---PPPPPPPP 588
GG GGG GGG + PPPPPPPP
Sbjct: 35 GGCGGGGGCGGGCGYGGGGGCGYGGGYGCGIPPPPPPPP 73
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 25.8 bits (54), Expect(2) = 1.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 590 GGGGGGGGXXXXKXXXXPPPGXXXXXXFF 676
GGGGGGGG P G FF
Sbjct: 10 GGGGGGGGASGGAGGGAPGGGGGGIRGFF 38
Score = 23.4 bits (48), Expect(2) = 1.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 584 PXGGGGGGGG 613
P GGGGGGG
Sbjct: 7 PSSGGGGGGG 16
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +2
Query: 554 PPXXXFFFXXPXGGGGGGGGXXXXKXXXXPPPGXXXXXXFFXPPPXP-PXP 703
PP + P GGGGGGG PPP P P P P P
Sbjct: 70 PPPFDGGYNRPYGGGGGGGYGRPQGYVPPPPPPPTQPEPEPEPRPEPQPEP 120
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 24.6 bits (51), Expect(2) = 1.6
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 644 GGXXXFXXXXHPPPPPPP 591
GG PPPPPPP
Sbjct: 23 GGGKGRPPPARPPPPPPP 40
Score = 24.6 bits (51), Expect(2) = 1.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 608 PPPPPPPXXXK 576
PPPPPPP K
Sbjct: 34 PPPPPPPRGVK 44
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 880 PPPPXXKXXXGGXKKKPPPXPXPR 951
PPPP K GG PPP P PR
Sbjct: 124 PPPPPRKSRAGG--SSPPPPPPPR 145
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 26.6 bits (56), Expect(2) = 2.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 611 PPPPPPPP 588
PPPPPPPP
Sbjct: 155 PPPPPPPP 162
Score = 21.8 bits (44), Expect(2) = 2.7
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 608 PPPPPPPXXXKK 573
P PPPPP +K
Sbjct: 171 PTPPPPPPAQQK 182
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 26.6 bits (56), Expect(2) = 2.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 611 PPPPPPPP 588
PPPPPPPP
Sbjct: 155 PPPPPPPP 162
Score = 21.8 bits (44), Expect(2) = 2.7
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 608 PPPPPPPXXXKK 573
P PPPPP +K
Sbjct: 171 PTPPPPPPAQQK 182
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 26.6 bits (56), Expect(2) = 2.8
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 611 PPPPPPPP 588
PPPPPPPP
Sbjct: 65 PPPPPPPP 72
Score = 21.8 bits (44), Expect(2) = 2.8
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -2
Query: 644 GGXXXFXXXXHPPPPPP 594
GG PPPPPP
Sbjct: 20 GGCCSMGPPPCPPPPPP 36
>AF067219-2|AAC17035.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.14 protein.
Length = 74
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 591 GGGGGGGVXXXXKXXXXPPXXXXXXXXFXXPPPPPP 698
GGGG GG + P PPPPPP
Sbjct: 23 GGGGAGGCCPPAQPGCGNPCQGAGPQYAAAPPPPPP 58
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 27.1 bits (57), Expect(2) = 4.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 878 PPPPPXXXXXXGGXKKNPPP 937
PPPPP GG PPP
Sbjct: 344 PPPPPPGMRYPGGMPPPPPP 363
Score = 20.6 bits (41), Expect(2) = 4.4
Identities = 9/28 (32%), Positives = 9/28 (32%)
Frame = +2
Query: 680 PPPXPPXPXKXXXXXXXXXXGGXXXXPP 763
PPP PP P G PP
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPP 311
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 27.1 bits (57), Expect(2) = 4.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 878 PPPPPXXXXXXGGXKKNPPP 937
PPPPP GG PPP
Sbjct: 334 PPPPPPGMRYPGGMPPPPPP 353
Score = 20.6 bits (41), Expect(2) = 4.4
Identities = 9/28 (32%), Positives = 9/28 (32%)
Frame = +2
Query: 680 PPPXPPXPXKXXXXXXXXXXGGXXXXPP 763
PPP PP P G PP
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPP 301
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 647 GGGXXXFXXXXHPPPPPPPP 588
GGG PPPPPPPP
Sbjct: 51 GGGGSYAAAPALPPPPPPPP 70
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 691 GGGGXKKXXXSXXXXGGXXXXFXXXXTPPPPPPP 590
GGG S GG PPPPPPP
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPP 69
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -2
Query: 686 GGGXKXXXXXXXXGGGXXXFXXXXHPPPPPPPP 588
GG GGG + PPPPPPP
Sbjct: 37 GGAPPCSSSSYATGGGGGSYAAAPALPPPPPPP 69
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 647 GGGXXXFXXXXHPPPPPPPP 588
GGG PPPPPPPP
Sbjct: 51 GGGGSYAAAPALPPPPPPPP 70
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 691 GGGGXKKXXXSXXXXGGXXXXFXXXXTPPPPPPP 590
GGG S GG PPPPPPP
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPP 69
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -2
Query: 686 GGGXKXXXXXXXXGGGXXXFXXXXHPPPPPPPP 588
GG GGG + PPPPPPP
Sbjct: 37 GGAPPCSSSSYATGGGGGSYAAAPALPPPPPPP 69
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -2
Query: 695 GGXGGGXKXXXXXXXXGGGXXXFXXXXHPPPPPP 594
GG GGG GGG F PPPPPP
Sbjct: 189 GGGGGGMGGGGGSGGSGGGSGRF-----PPPPPP 217
Score = 24.6 bits (51), Expect(2) = 5.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 590 GGGGGGGGXXXXKXXXXPPP 649
GGG GG G + PPP
Sbjct: 198 GGGSGGSGGGSGRFPPPPPP 217
Score = 22.6 bits (46), Expect(2) = 5.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 554 PPXXXFFFXXPXGGGGGGGG 613
PP F P GGGGG GG
Sbjct: 181 PPSNDF---GPGGGGGGMGG 197
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 26.2 bits (55), Expect(2) = 5.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 614 HPPPPPPPP 588
HPPPP PPP
Sbjct: 272 HPPPPVPPP 280
Score = 21.0 bits (42), Expect(2) = 5.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 608 PPPPPPPXXXK 576
PPPP PP K
Sbjct: 273 PPPPVPPPAKK 283
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 24.2 bits (50), Expect(2) = 5.3
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 611 PPPPPPPPXXXKK 573
PPP PPPP K+
Sbjct: 85 PPPRPPPPAGWKQ 97
Score = 23.0 bits (47), Expect(2) = 5.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 614 HPPPPPPPP 588
H PPPP PP
Sbjct: 82 HAPPPPRPP 90
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 24.2 bits (50), Expect(2) = 5.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 611 PPPPPPPPXXXKK 573
PPP PPPP K+
Sbjct: 85 PPPRPPPPAGWKQ 97
Score = 23.0 bits (47), Expect(2) = 5.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 614 HPPPPPPPP 588
H PPPP PP
Sbjct: 82 HAPPPPRPP 90
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 571 FFFXXXGGGGGGGGXXXXXXKXXPPPXXXXXXXFFXPPPXPP 696
F F GGGGGGGG PPP PP
Sbjct: 18 FLFPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPP 59
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +2
Query: 575 FXXPXGGGGGGGGXXXXKXXXXPPPGXXXXXXFFXPPPXPP 697
F P GGGGGGGG G PP PP
Sbjct: 18 FLFPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPP 58
>Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical
protein T16G1.8 protein.
Length = 365
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 611 PPPPPPPPXXXKKKXK 564
PPPPPPPP K K
Sbjct: 201 PPPPPPPPIDIPKDVK 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,599,577
Number of Sequences: 27780
Number of extensions: 318364
Number of successful extensions: 6949
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3261
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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