Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_C01
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 187 8e-48
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 187 8e-48
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 187 8e-48
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 137 9e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 127 1e-29
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 127 1e-29
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 103 2e-22
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 81 1e-15
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 74 1e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 74 1e-13
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 72 7e-13
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 72 7e-13
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 72 7e-13
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.006
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.010
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.21
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.37
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.37
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 32 0.49
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 1.5
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 2.0
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 30 2.0
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 2.6
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 2.6
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 187 bits (456), Expect = 8e-48
Identities = 87/94 (92%), Positives = 90/94 (95%)
Frame = +1
Query: 268 KDPFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 447
K FKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQAD
Sbjct: 51 KGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQAD 110
Query: 448 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 549
CAVL+VA GTGEFEAGISKNGQTREHALLA TLG
Sbjct: 111 CAVLVVACGTGEFEAGISKNGQTREHALLAQTLG 144
Score = 81.0 bits (191), Expect = 1e-15
Identities = 40/54 (74%), Positives = 43/54 (79%)
Frame = +3
Query: 114 MGKVKDSH*HCRLSDTIDSGKSTTTGHXIYKCGGIDKRAIEKFEKEAQEMGKGS 275
MGK K H + + +DSGKSTTTGH IYKCGGIDKR IEKFEKEAQEMGKGS
Sbjct: 1 MGKEK-VHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 187 bits (456), Expect = 8e-48
Identities = 87/94 (92%), Positives = 90/94 (95%)
Frame = +1
Query: 268 KDPFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 447
K FKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQAD
Sbjct: 51 KGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQAD 110
Query: 448 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 549
CAVL+VA GTGEFEAGISKNGQTREHALLA TLG
Sbjct: 111 CAVLVVACGTGEFEAGISKNGQTREHALLAQTLG 144
Score = 81.0 bits (191), Expect = 1e-15
Identities = 40/54 (74%), Positives = 43/54 (79%)
Frame = +3
Query: 114 MGKVKDSH*HCRLSDTIDSGKSTTTGHXIYKCGGIDKRAIEKFEKEAQEMGKGS 275
MGK K H + + +DSGKSTTTGH IYKCGGIDKR IEKFEKEAQEMGKGS
Sbjct: 1 MGKEK-VHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
Score = 52.0 bits (119), Expect = 6e-07
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = +2
Query: 551 VKQLIVGVNKMDSTEPPYSEPRF*GNQEGSILIHLXKIGYNPXAV 685
VKQLIV NKMDSTEPP+SE RF + + KIGYNP AV
Sbjct: 145 VKQLIVACNKMDSTEPPFSEARF-TEITNEVSGFIKKIGYNPKAV 188
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 187 bits (456), Expect = 8e-48
Identities = 87/94 (92%), Positives = 90/94 (95%)
Frame = +1
Query: 268 KDPFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 447
K FKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQAD
Sbjct: 51 KGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQAD 110
Query: 448 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 549
CAVL+VA GTGEFEAGISKNGQTREHALLA TLG
Sbjct: 111 CAVLVVACGTGEFEAGISKNGQTREHALLAQTLG 144
Score = 81.0 bits (191), Expect = 1e-15
Identities = 40/54 (74%), Positives = 43/54 (79%)
Frame = +3
Query: 114 MGKVKDSH*HCRLSDTIDSGKSTTTGHXIYKCGGIDKRAIEKFEKEAQEMGKGS 275
MGK K H + + +DSGKSTTTGH IYKCGGIDKR IEKFEKEAQEMGKGS
Sbjct: 1 MGKEK-VHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
Score = 52.0 bits (119), Expect = 6e-07
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = +2
Query: 551 VKQLIVGVNKMDSTEPPYSEPRF*GNQEGSILIHLXKIGYNPXAV 685
VKQLIV NKMDSTEPP+SE RF + + KIGYNP AV
Sbjct: 145 VKQLIVACNKMDSTEPPFSEARF-TEITNEVSGFIKKIGYNPKAV 188
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 137 bits (332), Expect = 9e-33
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = +1
Query: 268 KDPFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 447
K FKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQAD
Sbjct: 51 KGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQAD 110
Query: 448 CAVLIVA 468
CAVL+VA
Sbjct: 111 CAVLVVA 117
Score = 81.0 bits (191), Expect = 1e-15
Identities = 40/54 (74%), Positives = 43/54 (79%)
Frame = +3
Query: 114 MGKVKDSH*HCRLSDTIDSGKSTTTGHXIYKCGGIDKRAIEKFEKEAQEMGKGS 275
MGK K H + + +DSGKSTTTGH IYKCGGIDKR IEKFEKEAQEMGKGS
Sbjct: 1 MGKEK-VHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
Score = 48.8 bits (111), Expect = 5e-06
Identities = 26/55 (47%), Positives = 32/55 (58%)
Frame = +2
Query: 521 SMPCSLSPSDVKQLIVGVNKMDSTEPPYSEPRF*GNQEGSILIHLXKIGYNPXAV 685
+M S +D L+V NKMDSTEPP+SE RF + + KIGYNP AV
Sbjct: 101 NMITGTSQADCAVLVVACNKMDSTEPPFSEARF-TEITNEVSGFIKKIGYNPKAV 154
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 127 bits (306), Expect = 1e-29
Identities = 58/94 (61%), Positives = 70/94 (74%)
Frame = +1
Query: 268 KDPFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 447
K F YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD
Sbjct: 214 KASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQAD 273
Query: 448 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 549
A+L+V A TGEFE G GQT+EHALL +LG
Sbjct: 274 AAILVVNATTGEFETGFENGGQTKEHALLLRSLG 307
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 162 IDSGKSTTTGHXIYKCGGIDKRAIEKFEKEAQEMGKGSXQICLGIGQTK 308
+D+GKST GH ++ +D R I+KF+ EA GK S + +T+
Sbjct: 179 VDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 227
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 127 bits (306), Expect = 1e-29
Identities = 58/94 (61%), Positives = 70/94 (74%)
Frame = +1
Query: 268 KDPFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 447
K F YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD
Sbjct: 232 KASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQAD 291
Query: 448 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 549
A+L+V A TGEFE G GQT+EHALL +LG
Sbjct: 292 AAILVVNATTGEFETGFENGGQTKEHALLLRSLG 325
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 162 IDSGKSTTTGHXIYKCGGIDKRAIEKFEKEAQEMGKGSXQICLGIGQTK 308
+D+GKST GH ++ +D R I+KF+ EA GK S + +T+
Sbjct: 197 VDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 245
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 103 bits (246), Expect = 2e-22
Identities = 44/94 (46%), Positives = 64/94 (68%)
Frame = +1
Query: 268 KDPFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 447
++ + +W +D ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD
Sbjct: 153 RESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQAD 212
Query: 448 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 549
AVL+++A GEFE G + GQTREH++L T G
Sbjct: 213 LAVLVISARRGEFETGFDRGGQTREHSMLVKTAG 246
Score = 44.8 bits (101), Expect = 9e-05
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +3
Query: 162 IDSGKSTTTGHXIYKCGGIDKRAIEKFEKEAQEMGKGS 275
+D+GKST G ++ G +DKR +EK+E+EA+E G+ S
Sbjct: 118 VDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRES 155
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/76 (35%), Positives = 35/76 (46%)
Frame = +2
Query: 551 VKQLIVGVNKMDSTEPPYSEPRF*GNQEGSILIHLXKIGYNPXAVSLXXPXXGMARRQHV 730
VK L++ VNKMD + E RF EG + L K+G+NP P G+
Sbjct: 247 VKHLVILVNKMDDPTVKWEEERF-KEIEGKLTPFLRKLGFNPKTDITYVPCSGL-----T 300
Query: 731 GXFXPKMPXGSXDGXW 778
G F P GS +G W
Sbjct: 301 GAFIKDRPTGS-EGNW 315
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 81.0 bits (191), Expect = 1e-15
Identities = 40/54 (74%), Positives = 43/54 (79%)
Frame = +3
Query: 114 MGKVKDSH*HCRLSDTIDSGKSTTTGHXIYKCGGIDKRAIEKFEKEAQEMGKGS 275
MGK K H + + +DSGKSTTTGH IYKCGGIDKR IEKFEKEAQEMGKGS
Sbjct: 1 MGKEK-VHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 268 KDPFKYAWVLDKLKAER 318
K FKYAWVLDKLK +
Sbjct: 51 KGSFKYAWVLDKLKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 74.1 bits (174), Expect = 1e-13
Identities = 41/85 (48%), Positives = 54/85 (63%)
Frame = +1
Query: 295 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 474
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 475 TGEFEAGISKNGQTREHALLAFTLG 549
G E QT+EH +LA +G
Sbjct: 143 DGVME-------QTKEHLILAKQVG 160
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 74.1 bits (174), Expect = 1e-13
Identities = 41/85 (48%), Positives = 54/85 (63%)
Frame = +1
Query: 295 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 474
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 475 TGEFEAGISKNGQTREHALLAFTLG 549
G E QT+EH +LA +G
Sbjct: 143 DGVME-------QTKEHLILAKQVG 160
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 71.7 bits (168), Expect = 7e-13
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = +1
Query: 295 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 474
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 475 TGEFEAGISKNGQTREHALLAFTLG 549
G QTREH LLA +G
Sbjct: 147 DGPMP-------QTREHLLLARQVG 164
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 71.7 bits (168), Expect = 7e-13
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = +1
Query: 295 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 474
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 475 TGEFEAGISKNGQTREHALLAFTLG 549
G QTREH LLA +G
Sbjct: 148 DGPMP-------QTREHLLLARQVG 165
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 71.7 bits (168), Expect = 7e-13
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = +1
Query: 295 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 474
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 475 TGEFEAGISKNGQTREHALLAFTLG 549
G QTREH LLA +G
Sbjct: 148 DGPMP-------QTREHLLLARQVG 165
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +1
Query: 292 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 471
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 472 GTG 480
G
Sbjct: 136 NQG 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 292 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 471
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 472 GTG 480
G
Sbjct: 124 SAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +1
Query: 295 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 474
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 475 TG 480
G
Sbjct: 146 VG 147
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 325 GITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 480
GIT I + E +K VT +D PGH F G AD VL+VAA G
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDG 240
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 295 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 465
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 295 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 465
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.37
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 298 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 462
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 463 VAAGTG 480
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.37
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 298 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 462
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 463 VAAGTG 480
V A G
Sbjct: 107 VDAHEG 112
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 32.3 bits (70), Expect = 0.49
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 376 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 537
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLA 120
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 373 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 468
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 331 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 480
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.0
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Frame = -3
Query: 552 TSEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEISVSR 394
TSE E G+ L V RD F + +GTGS + H ++R DH + + S
Sbjct: 27 TSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFKFSG 86
Query: 393 SINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 283
S +D E+P ++ C++ +L + +Y SI
Sbjct: 87 SKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 331 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 480
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 382 IIDAPGHRDFIKNMITGTSQADCAVLIV 465
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,001,594
Number of Sequences: 27780
Number of extensions: 388761
Number of successful extensions: 888
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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