Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_B22
         (909 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1008 - 7987936-7988628,7988923-7989102                           33   0.24 
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610...    29   6.7  
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    29   6.7  
06_01_0438 + 3110703-3111945,3112486-3113057                           29   6.7  
03_05_0470 - 24647118-24647267,24647387-24647528,24649070-24650256     29   6.7  
10_05_0078 + 8891364-8891529,8891535-8891797                           28   8.9  

>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 33.5 bits (73), Expect = 0.24
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -3

Query: 721 RKRHASRREKGGQVSGKRQGRNQESARGSFQGETPG 614
           R R   RR  GG+V+G+   R++   RG+++GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>10_02_0167 -
           6100676-6102111,6102174-6102708,6102967-6103975,
           6104006-6105036
          Length = 1336

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 735 QREL*ESATLPEGRKAD-RYPVSGRVGTRRAHEGASRGKRLVS 610
           QREL   AT P     D R  ++GR   RR  + A+R +R VS
Sbjct: 32  QRELPRQATPPPRGTGDLRDQINGRRKARRTRDDANRSRRHVS 74


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = +2

Query: 518 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL-VPTL-PLTGYLSA 691
           CWR  +        T  D Q    +    +KD    P + PSC L+ +P L PL   L A
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQPLHYSLYA 342

Query: 692 F 694
           F
Sbjct: 343 F 343


>06_01_0438 + 3110703-3111945,3112486-3113057
          Length = 604

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -1

Query: 153 HCILVVVCPNSSMYLIMSGSN*PSXKGRSAAAVP 52
           HC + +VC +S+  L++S    P+    ++AA+P
Sbjct: 64  HCFVEIVCADSAGRLLLSAKPRPAPAATTSAALP 97


>03_05_0470 - 24647118-24647267,24647387-24647528,24649070-24650256
          Length = 492

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -3

Query: 802 RGGXCTPXPXLGAXDXHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNQES 647
           RGG   P   L      +   P A   R RHA+  + GG  S +++GR + S
Sbjct: 31  RGGNAAPRRPLARSFSAKNRSPRA---RNRHAAAGDGGGYGSPEQEGRGESS 79


>10_05_0078 + 8891364-8891529,8891535-8891797
          Length = 142

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 638 PSCALLVPTLPLTGYLSAFLPS 703
           P CA L P +P+ G L  F+PS
Sbjct: 92  PPCAFLPPDVPVEGILMIFVPS 113


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,539,392
Number of Sequences: 37544
Number of extensions: 481625
Number of successful extensions: 1407
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)