Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_B20
         (1062 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456961-1|CAG33242.1|  286|Homo sapiens SSR1 protein.                 36   0.19 
BT007387-1|AAP36051.1|  286|Homo sapiens signal sequence recepto...    36   0.19 
BC007710-1|AAH07710.1|  286|Homo sapiens signal sequence recepto...    36   0.19 
AL139095-1|CAI16444.1|  286|Homo sapiens signal sequence recepto...    36   0.19 
AK222809-1|BAD96529.1|  286|Homo sapiens signal sequence recepto...    36   0.19 
AK222762-1|BAD96482.1|  286|Homo sapiens signal sequence recepto...    36   0.19 
AK075562-1|BAC11701.1|  259|Homo sapiens protein ( Homo sapiens ...    36   0.19 
AF156965-1|AAD48778.1|  286|Homo sapiens translocon-associated p...    36   0.19 

>CR456961-1|CAG33242.1|  286|Homo sapiens SSR1 protein.
          Length = 286

 Score = 36.3 bits (80), Expect = 0.19
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +1

Query: 460 STKGSVDYVVESRDGXSXGYPLDYTYYXPNXTAVXL 567
           + KG+ D++VES D  S  YP DY +Y  N TA+ L
Sbjct: 108 TNKGTEDFIVESLDA-SFRYPQDYQFYIQNFTALPL 142


>BT007387-1|AAP36051.1|  286|Homo sapiens signal sequence receptor,
           alpha (translocon-associated protein alpha) protein.
          Length = 286

 Score = 36.3 bits (80), Expect = 0.19
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +1

Query: 460 STKGSVDYVVESRDGXSXGYPLDYTYYXPNXTAVXL 567
           + KG+ D++VES D  S  YP DY +Y  N TA+ L
Sbjct: 108 TNKGTEDFIVESLDA-SFRYPQDYQFYIQNFTALPL 142


>BC007710-1|AAH07710.1|  286|Homo sapiens signal sequence receptor,
           alpha (translocon-associated protein alpha) protein.
          Length = 286

 Score = 36.3 bits (80), Expect = 0.19
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +1

Query: 460 STKGSVDYVVESRDGXSXGYPLDYTYYXPNXTAVXL 567
           + KG+ D++VES D  S  YP DY +Y  N TA+ L
Sbjct: 108 TNKGTEDFIVESLDA-SFRYPQDYQFYIQNFTALPL 142


>AL139095-1|CAI16444.1|  286|Homo sapiens signal sequence receptor,
           alpha (translocon-associated protein alpha) protein.
          Length = 286

 Score = 36.3 bits (80), Expect = 0.19
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +1

Query: 460 STKGSVDYVVESRDGXSXGYPLDYTYYXPNXTAVXL 567
           + KG+ D++VES D  S  YP DY +Y  N TA+ L
Sbjct: 108 TNKGTEDFIVESLDA-SFRYPQDYQFYIQNFTALPL 142


>AK222809-1|BAD96529.1|  286|Homo sapiens signal sequence receptor,
           alpha variant protein.
          Length = 286

 Score = 36.3 bits (80), Expect = 0.19
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +1

Query: 460 STKGSVDYVVESRDGXSXGYPLDYTYYXPNXTAVXL 567
           + KG+ D++VES D  S  YP DY +Y  N TA+ L
Sbjct: 108 TNKGTEDFIVESLDA-SFRYPQDYQFYIQNFTALPL 142


>AK222762-1|BAD96482.1|  286|Homo sapiens signal sequence receptor,
           alpha variant protein.
          Length = 286

 Score = 36.3 bits (80), Expect = 0.19
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +1

Query: 460 STKGSVDYVVESRDGXSXGYPLDYTYYXPNXTAVXL 567
           + KG+ D++VES D  S  YP DY +Y  N TA+ L
Sbjct: 108 TNKGTEDFIVESLDA-SFRYPQDYQFYIQNFTALPL 142


>AK075562-1|BAC11701.1|  259|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0262 fis, clone NT2RP3004505, highly similar to
           TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT PRECURSOR.
           ).
          Length = 259

 Score = 36.3 bits (80), Expect = 0.19
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +1

Query: 460 STKGSVDYVVESRDGXSXGYPLDYTYYXPNXTAVXL 567
           + KG+ D++VES D  S  YP DY +Y  N TA+ L
Sbjct: 81  TNKGTEDFIVESLDA-SFRYPQDYQFYIQNFTALPL 115


>AF156965-1|AAD48778.1|  286|Homo sapiens translocon-associated
           protein alpha subunit protein.
          Length = 286

 Score = 36.3 bits (80), Expect = 0.19
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +1

Query: 460 STKGSVDYVVESRDGXSXGYPLDYTYYXPNXTAVXL 567
           + KG+ D++VES D  S  YP DY +Y  N TA+ L
Sbjct: 108 TNKGTEDFIVESLDA-SFRYPQDYQFYIQNFTALPL 142


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,536,917
Number of Sequences: 237096
Number of extensions: 1468578
Number of successful extensions: 1730
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1730
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14484231412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)