Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_B19
         (1105 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    32   0.84 
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    32   0.84 
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    32   0.84 
AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    29   5.9  
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    29   5.9  
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    29   5.9  

>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
            protein 1, isoformb protein.
          Length = 1437

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 15/46 (32%), Positives = 15/46 (32%)
 Frame = +1

Query: 964  PPPXLXAPXXSXXXRPPPPRXXXRXXPXXITPXSXXASPXPXPPXG 1101
            PPP    P       PPPP       P    P      P P PP G
Sbjct: 746  PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
            protein 1, isoforma protein.
          Length = 1435

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 15/46 (32%), Positives = 15/46 (32%)
 Frame = +1

Query: 964  PPPXLXAPXXSXXXRPPPPRXXXRXXPXXITPXSXXASPXPXPPXG 1101
            PPP    P       PPPP       P    P      P P PP G
Sbjct: 746  PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 15/46 (32%), Positives = 15/46 (32%)
 Frame = +1

Query: 964  PPPXLXAPXXSXXXRPPPPRXXXRXXPXXITPXSXXASPXPXPPXG 1101
            PPP    P       PPPP       P    P      P P PP G
Sbjct: 329  PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374


>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
            Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
            isoform b protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 14/46 (30%), Positives = 15/46 (32%)
 Frame = +1

Query: 964  PPPXLXAPXXSXXXRPPPPRXXXRXXPXXITPXSXXASPXPXPPXG 1101
            PPP    P       PPPP       P   +P        P PP G
Sbjct: 241  PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 286


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
            Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
            isoform c protein.
          Length = 539

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 14/46 (30%), Positives = 15/46 (32%)
 Frame = +1

Query: 964  PPPXLXAPXXSXXXRPPPPRXXXRXXPXXITPXSXXASPXPXPPXG 1101
            PPP    P       PPPP       P   +P        P PP G
Sbjct: 262  PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 307


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
            Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
            isoform a protein.
          Length = 524

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 14/46 (30%), Positives = 15/46 (32%)
 Frame = +1

Query: 964  PPPXLXAPXXSXXXRPPPPRXXXRXXPXXITPXSXXASPXPXPPXG 1101
            PPP    P       PPPP       P   +P        P PP G
Sbjct: 247  PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 292


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,698,631
Number of Sequences: 27780
Number of extensions: 128761
Number of successful extensions: 380
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 329
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2981737830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)