Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_B17
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   196   1e-50
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    30   2.5  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  196 bits (479), Expect = 1e-50
 Identities = 93/164 (56%), Positives = 112/164 (68%)
 Frame = +1

Query: 217 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 396
           VQDKNKYNTPKYRLIVR++NKDV  Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA
Sbjct: 38  VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97

Query: 397 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 576
           AY+TG                          +YNVE  +     F+  LD+GLARTTTG+
Sbjct: 98  AYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGS 156

Query: 577 RVFGAMKGAVDGGLNVPHSIKRFLXYDAESKKFNAEVHRAHIFG 708
           ++F  MKG  DGG+NVPHS  RF  +D ESK++NAE HR  I G
Sbjct: 157 KIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILG 200



 Score = 71.3 bits (167), Expect = 8e-13
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +3

Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 212
           MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL
Sbjct: 1   MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRL 36


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 340  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 227
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 340  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 227
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +1

Query: 235 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 354
           YN P+YR +++L  K   C+     + GD++   +CA +  EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,794,439
Number of Sequences: 27780
Number of extensions: 378828
Number of successful extensions: 889
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)