Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_B16
(894 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0129 - 31883732-31883854,31883989-31884051,31884213-318842... 93 3e-19
09_04_0174 + 15346123-15346207,15346350-15346502,15346623-153467... 89 6e-18
12_01_0513 + 4059586-4059620,4060155-4060365,4060470-4060724,406... 85 7e-17
01_01_1049 + 8275837-8275859,8276428-8276503,8276545-8276634,827... 49 6e-06
05_07_0284 - 28943527-28943625,28944417-28944785 30 2.2
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707... 29 5.0
08_02_0890 + 22309061-22309086,22309172-22309253,22309349-223094... 29 6.6
03_05_0229 - 22142255-22142344,22142471-22142527,22142621-221427... 29 6.6
01_01_1230 - 9936226-9936706,9938145-9938200,9939145-9939233,994... 28 8.7
>03_06_0129 -
31883732-31883854,31883989-31884051,31884213-31884272,
31884724-31884784,31884934-31885004,31885313-31885389,
31885856-31885913,31885995-31886048,31886279-31886297,
31886359-31886466,31886574-31886690,31886836-31886919,
31887079-31887171,31887279-31887499,31888294-31888371,
31889237-31889499,31890109-31890247
Length = 562
Score = 93.1 bits (221), Expect = 3e-19
Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = +2
Query: 386 IFVNRSLHLENVKFYGFDMDYTLAEYKSPQYETLGFNLTKERLVVK-GYPREILEFEYDP 562
IF NRSL++ N+ GFDMDYTLA+YK +E L ++ T E+LV GYP E+L +++D
Sbjct: 83 IFCNRSLNMRNITAVGFDMDYTLAQYKPETFEALAYHGTIEKLVKDLGYPEELLTWQFDW 142
Query: 563 SFPVRGLWFDTLYGNLLKVDAYGNILVCVHGFEFLKHSQVYELY 694
+ VRGL D GN+LK+D + + V HGF + + Y
Sbjct: 143 KYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFREMSKEEKVSAY 186
>09_04_0174 +
15346123-15346207,15346350-15346502,15346623-15346759,
15346856-15347005,15347405-15347506,15347832-15347996,
15348402-15348499,15348704-15348827,15349056-15349145,
15349555-15349599,15350438-15350833
Length = 514
Score = 88.6 bits (210), Expect = 6e-18
Identities = 46/111 (41%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
Frame = +2
Query: 386 IFVNRSLHLENVKFYGFDMDYTLAEYKSPQYETLGFNLTKERLVVK-GYPREILEFEYDP 562
I+VN+++ L++++ YGFD DYTL+ Y S + L ++L K+ LV + YP L++EYD
Sbjct: 81 IYVNKNVKLDDLQVYGFDYDYTLSHY-SEHLQCLIYDLAKKHLVNELKYPESCLKYEYDH 139
Query: 563 SFPVRGLWFDTLYGNLLKVDAYGNILV--CVHGFEFLKHSQVYELYPNKFL 709
FP+RGL++D L G LLK+D +G+I C G L S++ ELY + +
Sbjct: 140 GFPIRGLYYDRLKGCLLKLDFFGSIEPDGCFFGRHKLSLSEIKELYGTRHI 190
>12_01_0513 +
4059586-4059620,4060155-4060365,4060470-4060724,
4060801-4060865,4061120-4061194,4061440-4061575,
4061661-4061753,4061838-4061983,4062074-4062174,
4062259-4062434,4063823-4063900,4063991-4064199,
4064286-4064378,4064888-4064971,4065405-4065506,
4065591-4065678,4065756-4065809,4065869-4066075,
4066970-4067026,4067171-4067225,4067737-4067813,
4067941-4068007,4068383-4068444,4068541-4068603,
4068702-4068830
Length = 905
Score = 85.0 bits (201), Expect = 7e-17
Identities = 40/109 (36%), Positives = 66/109 (60%)
Frame = +2
Query: 383 RIFVNRSLHLENVKFYGFDMDYTLAEYKSPQYETLGFNLTKERLVVKGYPREILEFEYDP 562
+IF +R++++E++K GF M+YTL YK +E L + K+RLV YP +ILE+ Y+
Sbjct: 381 QIFCSRTVNMEDIKAIGFKMEYTLINYKVT-FENLAYVEAKKRLVNGKYPEKILEWNYNS 439
Query: 563 SFPVRGLWFDTLYGNLLKVDAYGNILVCVHGFEFLKHSQVYELYPNKFL 709
+RGL D GN++KVD Y N+ + HG + + + +Y + F+
Sbjct: 440 EHMIRGLIIDKKKGNIIKVDHYNNVKMSYHGMNEMPYEESKNVYGSTFM 488
>01_01_1049 +
8275837-8275859,8276428-8276503,8276545-8276634,
8276721-8276836,8276918-8277017,8277808-8277879,
8277954-8278001,8278093-8278170,8278272-8278391,
8278496-8278601,8279574-8279737,8280403-8280537,
8280766-8280896,8282016-8282094,8282284-8282373
Length = 475
Score = 48.8 bits (111), Expect = 6e-06
Identities = 26/64 (40%), Positives = 36/64 (56%)
Frame = +2
Query: 524 GYPREILEFEYDPSFPVRGLWFDTLYGNLLKVDAYGNILVCVHGFEFLKHSQVYELYPNK 703
G+P + LEF DP +RGL D GNL+K D +G I +HG + L S V E+Y +
Sbjct: 51 GFPVDDLEF--DPDLVIRGLIMDKDKGNLVKADRFGYIKRAMHGTQMLSTSAVSEIYGRE 108
Query: 704 FLTL 715
+ L
Sbjct: 109 LVDL 112
>05_07_0284 - 28943527-28943625,28944417-28944785
Length = 155
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -1
Query: 594 VSNQRPLTGNEGSYSNSNISLGYPLTTNLSLVKLNPNVSYCGDLY 460
+ + PL G +G Y N + +P T + S + NP ++ ++Y
Sbjct: 111 LDRRSPLRGVQGQYLNLRTNSHHPCTPSASYIYANPEIARGAEIY 155
>07_03_0809 -
21669632-21669637,21669871-21670131,21670573-21670752,
21671458-21672819
Length = 602
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 398 RSLHLENVKFYGFDMDYTLAEYKSPQYETLG 490
R LHLE+V+F G DYTL + P E LG
Sbjct: 300 RELHLEHVRFNG---DYTLDDAMLPLLEYLG 327
>08_02_0890 +
22309061-22309086,22309172-22309253,22309349-22309441,
22309526-22309720
Length = 131
Score = 28.7 bits (61), Expect = 6.6
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +2
Query: 461 YKSPQYETLGFNLTKERLVVKGYPREILEFEYDPSFPVRGLWFD--TLYGNLLKVDAYGN 634
YK P L E L V G R EF Y PS P WFD TL + + + +
Sbjct: 38 YKQPNLSNLCGYYVCEMLRVCGRYRT--EFTYLPSIPYNASWFDQKTLINLCVDLCRFIH 95
Query: 635 ILVCVHGFEF 664
+C H EF
Sbjct: 96 RDICNHLEEF 105
>03_05_0229 -
22142255-22142344,22142471-22142527,22142621-22142705,
22143552-22143677,22143750-22143793,22143877-22143999,
22144078-22144216,22148795-22151292
Length = 1053
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 625 LREYFSVCTWI*IFKTFTGIRI 690
++EYFS+C W+ + + F +RI
Sbjct: 134 VKEYFSLCIWVNVSRQFDAMRI 155
>01_01_1230 -
9936226-9936706,9938145-9938200,9939145-9939233,
9940820-9940923,9943756-9943931,9945130-9945713,
9947441-9947513
Length = 520
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +2
Query: 236 ETLEIPDKSVAGIDKPLSRVDRSELELDSFAESLTTMHSAWFDKRVLEHRIFVNRSLH-- 409
E +++ ++ G KP+S+ + E + F E+ + + +RVLE N+
Sbjct: 25 EEMQVNKEAPLGCLKPISQYNLQEQRSNGFPENSEKKNDSIATERVLEASPLPNQGFFRP 84
Query: 410 LENVKFYGFDMDYTLAEYKSP 472
++ ++Y + Y A+Y+ P
Sbjct: 85 VQRTEYYAYPFIY--ADYQMP 103
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,247,299
Number of Sequences: 37544
Number of extensions: 387700
Number of successful extensions: 809
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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