Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_B08
         (1208 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY606112-1|AAT38949.1|  346|Homo sapiens ES protein protein.           33   1.6  
U33819-1|AAB04121.1|  537|Homo sapiens MAZ protein.                    33   2.1  

>AY606112-1|AAT38949.1|  346|Homo sapiens ES protein protein.
          Length = 346

 Score = 33.5 bits (73), Expect = 1.6
 Identities = 17/34 (50%), Positives = 18/34 (52%)
 Frame = +3

Query: 576 RPGPGXRXRGXXSPPLAPXAXXSPTWAXXPXPRT 677
           RP PG   R    PPLAP A  SP  +  P PRT
Sbjct: 1   RPSPGMLLRPRRPPPLAPPAPPSPA-SPDPEPRT 33


>U33819-1|AAB04121.1|  537|Homo sapiens MAZ protein.
          Length = 537

 Score = 33.1 bits (72), Expect = 2.1
 Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
 Frame = +3

Query: 501 RAPPXXRGXAAAXXGPRRP---XXARXGRPGPGXRXRGXXSP-PLAPXAXXSPTWAXXPX 668
           R PP  RG  A   GP R      A+ GRPG   R R    P P  P +   P  A    
Sbjct: 3   RLPPAGRGARAGGAGPGRANAFGAAQPGRPGGAPRARAPRGPRPRPPLSPGGPAAAEAMF 62

Query: 669 P 671
           P
Sbjct: 63  P 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,883,734
Number of Sequences: 237096
Number of extensions: 1150067
Number of successful extensions: 1970
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1964
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17064331300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)