Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_B02
         (872 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0206 + 41990251-41992032,41992131-41992361                       30   2.8  
06_01_0081 + 646100-646346,646432-646848,647067-647170,648152-64...    29   3.7  
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344...    28   8.5  

>01_07_0206 + 41990251-41992032,41992131-41992361
          Length = 670

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
 Frame = +1

Query: 163 EGYPISGHFSKRHPRDVTWDKQVGG-----GKVFGTLGQNDDGLFGKAGYNREIFNDDRG 327
           EG P+    S+R  R   W++Q+GG      +++G     D  L     +NR+  N D+ 
Sbjct: 221 EGKPMEDFDSERSRRACLWERQIGGRGDDVNELYGPSSCKD--LLTLYNFNRQYVNMDKT 278

Query: 328 KLTGQA 345
            L+ QA
Sbjct: 279 WLSKQA 284


>06_01_0081 + 646100-646346,646432-646848,647067-647170,648152-648352,
            649088-649798,649944-650674,650942-651017,651096-651182,
            651429-651517,651917-651973,652402-652510,652590-652649,
            652835-652919,653178-653242,653694-653753,653869-653913,
            654697-654800,654877-655099
          Length = 1156

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 130  VSTQKFIWEYEEGYPISGHFSKRH 201
            VS+ K IW+YE G PI G  +  H
Sbjct: 964  VSSFKIIWQYEAGAPIFGSLAIHH 987


>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
            29334956-29335045,29335120-29335155,29335222-29336553,
            29337331-29337497,29337519-29337724,29337815-29338036,
            29338332-29338381,29338754-29338870,29339471-29339551,
            29339656-29339694,29340464-29340636,29340769-29340826,
            29340934-29340987,29341066-29341613,29341695-29341755,
            29342180-29342260,29342448-29342630,29342908-29343162,
            29343304-29343423,29343497-29344901,29344988-29345085,
            29345164-29345218,29345307-29345366,29346498-29346697
          Length = 2077

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 381  STNYGGRLDWANKNAEAAIDINRQI 455
            S+ +GG L W N + E+ +D +RQ+
Sbjct: 960  SSLHGGSLPWKNTDFESTVDFDRQL 984


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,800,620
Number of Sequences: 37544
Number of extensions: 461173
Number of successful extensions: 1325
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)