Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_B01
(930 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.043
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.043
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.10
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.18
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 2.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.2
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 2.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.8
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 8.7
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 8.7
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 26 8.7
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.5 bits (73), Expect = 0.043
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 675 PPXGXXXRAPXRXXPPPPXPPXEXPPPPPXXGRXPPAXPXXP 800
PP AP + P P PP PPPP P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 29.9 bits (64), Expect = 0.53
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 723 PPXPPXEXPPPPPXXGRXPPAXPXXPA 803
PP PPPPP PP+ P PA
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPA 1725
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 464 PXXSXPPPPXXXGXXXAPPPAPP 532
P S PPPP PP APP
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 675 PPXGXXXRAPXRXXPPPPXPPXEXPPPPPXXGRXPPAXP 791
PP P P P PP PPPP P+ P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSA--PPPPLPASSAPSVP 1744
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.5 bits (73), Expect = 0.043
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 732 PPXEXPPPPPXXGRXPPAXPXXP 800
PP PPPPP G PP+ P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 31.5 bits (68), Expect = 0.18
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Frame = +3
Query: 702 PXRXXPPPPXP---PXEXPPPPPXXGRXPPAXPXXPAR 806
P PPPP P P PPPPP G PA+
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQ 43
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = +2
Query: 458 SXPXXSXPPPPXXXGXXXA---PPPAPPXF 538
S P + PPPP G PPP PP +
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPPPPPPGY 32
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 675 PPXGXXXRAPXRXXPPPPXPPXEXPPPPP 761
PP P PP PP PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPP---PPPPP 30
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -3
Query: 799 GXXGXAGGXRPXXGGGGGXSXGGXGGGGXXRXG 701
G G GG GGG G + GG GG G R G
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 31.5 bits (68), Expect = 0.18
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -3
Query: 805 RAGXXGXAGGXRPXXGGGGGXSXGGXGGGGXXRXGAR 695
R G G GG GG G GG GG R GAR
Sbjct: 18 RGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGAR 54
Score = 31.5 bits (68), Expect = 0.18
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 808 SRAGXXGXAGGXRPXXGGGGGXSXGGXGGGGXXRXGAR 695
+R G G A G R GG G G GG G + GA+
Sbjct: 35 ARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAK 72
Score = 30.7 bits (66), Expect = 0.31
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 808 SRAGXXGXAGGXRPXXGGGGGXSXGGXGGG-GXXRXGAR 695
SR G G GG GG GG GG GG G R GAR
Sbjct: 7 SRGGRGGSRGGRGGFNGGRGGF-GGGRGGARGGGRGGAR 44
Score = 30.7 bits (66), Expect = 0.31
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -3
Query: 808 SRAGXXGXAGGXRPXXGGGGGXSXGGXGGGGXXRXGAR 695
SR G G GG R GGG G + GG GG G R
Sbjct: 14 SRGGRGGFNGG-RGGFGGGRGGARGGGRGGARGGRGGR 50
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 805 RAGXXGXAGGXRPXXGGGGGXSXGGXGGGGXXRXGA 698
R G G GG R GG GG GG R G+
Sbjct: 25 RGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGS 60
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.18
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = +3
Query: 699 APXRXXPPPPXPPXEXPPPPP----XXGRXPPAXPXXP 800
AP PPP P PPPPP G PP P P
Sbjct: 745 APAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 0.93
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 702 PXRXXPPPPXPPXEXPPPPPXXGRXPPAXP 791
P P P P PPP P G PP P
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 29.1 bits (62), Expect = 0.93
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = +3
Query: 699 APXRXXPPPPXPPXEX-----PPPPPXXGRXPPAXPXXPARLF 812
AP PPPP PP PPPPP PPA +R +
Sbjct: 755 APIMGGPPPPPPPPGVAGAGPPPPPP----PPPAVSAGGSRYY 793
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 479 PPPPXXXGXXXAPPPAPP 532
PPPP G PPP PP
Sbjct: 765 PPPPGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 717 PPPPXPPXEXPPPPPXXGRXPPAXP 791
PPPP P P P P PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 479 PPPPXXXGXXXAPPPAPP 532
PPPP G A PP PP
Sbjct: 762 PPPPPPPGVAGAGPPPPP 779
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 479 PPPPXXXGXXXAPPPAPP 532
PPPP PPP PP
Sbjct: 764 PPPPPGVAGAGPPPPPPP 781
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -3
Query: 799 GXXGXAGGXRPXXGGGGGXSXGGXGGGGXXRXG 701
G G +GG P GG GG GG GG G G
Sbjct: 192 GFGGGSGGPPPGPGGFGG--FGGFGGEGHHHGG 222
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 4/40 (10%)
Frame = +3
Query: 699 APXRXXPPPPXPPXEXPPP---PPXXGRXPP-AXPXXPAR 806
AP R PPP P P P PP PP A P P +
Sbjct: 143 APPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/35 (31%), Positives = 12/35 (34%)
Frame = +3
Query: 696 RAPXRXXPPPPXPPXEXPPPPPXXGRXPPAXPXXP 800
R P P P PP PP + PP P
Sbjct: 138 RPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP 172
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/42 (28%), Positives = 12/42 (28%)
Frame = +3
Query: 675 PPXGXXXRAPXRXXPPPPXPPXEXPPPPPXXGRXPPAXPXXP 800
PP P PP P PPP PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAP 165
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 720 PPPXPPXEXPPPPPXXGRXPPAXPXXPA 803
PP PP E PP P PP P A
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 699 APXRXXPPPPXPPXEXPPPPPXXGRXPPAXP 791
AP PP P P PP PP P P
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 675 PPXGXXXRAPXRXXPPPPXPPXEXPPPPPXXGRXPPAXP 791
P G P PP P P PP PP P P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +3
Query: 675 PPXGXXXRAPXRXXPPPPXPPXEXPPPPPXXGRXPPAXPXXPAR 806
PP P PP PP PP P P P A+
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAK 1235
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 675 PPXGXXXRAPXRXXPPPPXPPXEXPPPPPXXGRXPP 782
P G P PP P P PP P + PP
Sbjct: 1203 PSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 702 PXRXXPPPPXPPXEXPPPPPXXGRXPPAXPXXPA 803
P PP P P PP P PP P A
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 5/47 (10%)
Frame = +3
Query: 675 PPXGXXXRAPXRXXPPPPX-----PPXEXPPPPPXXGRXPPAXPXXP 800
PP G R P PP PP P PP PA P P
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 717 PPPPXPPXEXPPPPPXXGRXPPAXPXXPA 803
PP P PP PP PPA PA
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAPAPA 485
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Frame = +3
Query: 717 PPPPXPPX---EXPPPPPXXGRXPPAXPXXP 800
PP P P PPPPP P+ P P
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Frame = +3
Query: 702 PXRXXPPPPX--PPXEXPPPPPXXGRXPPAXPXXP 800
P PPPP P E PPPP P P
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Frame = +3
Query: 702 PXRXXPPPPX--PPXEXPPPPPXXGRXPPAXPXXP 800
P PPPP P E PPPP P P
Sbjct: 216 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Frame = +3
Query: 702 PXRXXPPPPX--PPXEXPPPPPXXGRXPPAXPXXP 800
P PPPP P E PPPP P P
Sbjct: 229 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Frame = +3
Query: 702 PXRXXPPPPX--PPXEXPPPPPXXGRXPPAXPXXP 800
P PPPP P E PPPP P P
Sbjct: 242 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Frame = +3
Query: 702 PXRXXPPPPX--PPXEXPPPPPXXGRXPPAXPXXP 800
P PPPP P E PPPP P P
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Frame = +3
Query: 702 PXRXXPPPPX--PPXEXPPPPPXXGRXPPAXPXXP 800
P PPPP P E PPPP P P
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Frame = +3
Query: 702 PXRXXPPPPX--PPXEXPPPPPXXGRXPPAXPXXP 800
P PPPP P E PPPP P P
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Frame = +3
Query: 702 PXRXXPPPPX--PPXEXPPPPPXXGRXPPAXPXXP 800
P PPPP P E PPPP P P
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Frame = +3
Query: 702 PXRXXPPPPX--PPXEXPPPPPXXGRXPPAXPXXP 800
P PPPP P E PPPP P P
Sbjct: 307 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 3/28 (10%)
Frame = +3
Query: 717 PPPPXP---PXEXPPPPPXXGRXPPAXP 791
PPPP P P PP PPA P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGP 1909
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 455 GSXPXXSXPPPPXXXGXXXAPPPAPPXF 538
G+ P + PP P A PP PP F
Sbjct: 161 GNLPNPAMPPIPFLPFNPAAQPPFPPPF 188
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,540,021
Number of Sequences: 5004
Number of extensions: 17004
Number of successful extensions: 323
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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