BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_A11
(891 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 197 2e-51
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 196 3e-51
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 192 6e-50
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 172 5e-44
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 149 4e-37
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 74 3e-14
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 62 8e-11
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 45 1e-05
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 27 2.7
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 27 3.6
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 26 6.3
SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr 2|... 26 6.3
SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces pomb... 26 8.3
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 197 bits (481), Expect = 2e-51
Identities = 96/168 (57%), Positives = 120/168 (71%)
Frame = +2
Query: 386 NRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQTVQHDVKFFPFK 565
NRITPSYVAFT+D ERL+G+AAKNQ +NPENT+FD KRLIGR++ ++T+ D+K FPF
Sbjct: 66 NRITPSYVAFTED-ERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTMAKDIKSFPFH 124
Query: 566 VVEKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDA 745
+V ++P V+V K F PEEISAM+L+KMK+TAEAYLGK VTHAVVTVPAYFNDA
Sbjct: 125 IVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDA 184
Query: 746 QRQATKMLVQFXXXXXXXXXXXXXXXXXAYGLDKKEGKKNVLXFDXGG 889
QRQATK AYGLDK + +K+++ +D GG
Sbjct: 185 QRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDTEKHIVVYDLGG 232
Score = 63.7 bits (148), Expect = 3e-11
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +1
Query: 292 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQG 384
GTVIGIDLGTTYSCV V KNGRVEIIANDQG
Sbjct: 35 GTVIGIDLGTTYSCVAVMKNGRVEIIANDQG 65
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 196 bits (478), Expect = 3e-51
Identities = 102/169 (60%), Positives = 118/169 (69%), Gaps = 1/169 (0%)
Frame = +2
Query: 386 NRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQTVQHDVKFFPFK 565
NR TPSYVAFT D ERLIGDAAKNQ+ NP NT+FDAKRLIGR++ D VQ D+K +PFK
Sbjct: 33 NRTTPSYVAFT-DTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFK 91
Query: 566 VVEKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDA 745
V+ K+ KP +QV+ K F PEEIS+MVL KM+ETAEAYLG KVT AVVTVPAYFND+
Sbjct: 92 VISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDS 151
Query: 746 QRQATKMLVQFXXXXXXXXXXXXXXXXXAYGLDK-KEGKKNVLXFDXGG 889
QRQATK AYGLD+ +G+ NVL FD GG
Sbjct: 152 QRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGG 200
Score = 54.4 bits (125), Expect = 2e-08
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 301 IGIDLGTTYSCVGVYKNGRVEIIANDQG 384
IGIDLGTTYSCVG + N RVEIIANDQG
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQG 32
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 192 bits (468), Expect = 6e-50
Identities = 100/169 (59%), Positives = 118/169 (69%), Gaps = 1/169 (0%)
Frame = +2
Query: 386 NRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQTVQHDVKFFPFK 565
NR TPSYVAFT D ERLIGDAAKNQ+ NP NT+FDAKRLIGR ++D VQ D+K +PFK
Sbjct: 33 NRTTPSYVAFT-DTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFK 91
Query: 566 VVEKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDA 745
V+EK+ KP +QV+ K F PEEIS+MVL KM+E+AEA+LG KVT AVVTVPAYFND+
Sbjct: 92 VIEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDS 151
Query: 746 QRQATKMLVQFXXXXXXXXXXXXXXXXXAYGLDK-KEGKKNVLXFDXGG 889
QRQATK AYGLD+ + + NVL FD GG
Sbjct: 152 QRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGG 200
Score = 54.4 bits (125), Expect = 2e-08
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 301 IGIDLGTTYSCVGVYKNGRVEIIANDQG 384
IGIDLGTTYSCVG + N RVEIIANDQG
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQG 32
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 172 bits (419), Expect = 5e-44
Identities = 92/175 (52%), Positives = 110/175 (62%), Gaps = 1/175 (0%)
Frame = +2
Query: 368 LPMTRXNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQTVQHDV 547
+P + R TPS+VAFT+ ERL+GDAAKNQ NP NTVFDAKRLIGR + D Q D+
Sbjct: 31 IPNDQGARTTPSFVAFTET-ERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKDI 89
Query: 548 KFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVP 727
K +PFKV++ N P ++V K F +EISAMVLTKMKE +EA L K+V AV+TVP
Sbjct: 90 KHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVP 149
Query: 728 AYFNDAQRQATKMLVQFXXXXXXXXXXXXXXXXXAYGLDKKEGK-KNVLXFDXGG 889
AYF+D+QR ATK AYGLD K K KNVL FD GG
Sbjct: 150 AYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGG 204
Score = 48.4 bits (110), Expect = 1e-06
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +1
Query: 301 IGIDLGTTYSCVGVYKNGRVEIIANDQG 384
IGIDLGTTYSCV V++ VEII NDQG
Sbjct: 9 IGIDLGTTYSCVAVWETANVEIIPNDQG 36
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 149 bits (362), Expect = 4e-37
Identities = 83/176 (47%), Positives = 105/176 (59%)
Frame = +2
Query: 362 KSLPMTRXNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQTVQH 541
K + R TPS VAFT+DGERL+G +AK Q NPENT F KRLIGR + + VQ
Sbjct: 73 KVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQR 132
Query: 542 DVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVT 721
D+K P+K+VE +S ++ ++G K ++P +I +L+KM+ETA YLGK V +AVVT
Sbjct: 133 DIKEVPYKIVE-HSNGDAWLE-ARG-KTYSPSQIGGFILSKMRETASTYLGKDVKNAVVT 189
Query: 722 VPAYFNDAQRQATKMLVQFXXXXXXXXXXXXXXXXXAYGLDKKEGKKNVLXFDXGG 889
VPAYFND+QRQATK AYGLDKK V FD GG
Sbjct: 190 VPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK-NDAIVAVFDLGG 244
Score = 37.5 bits (83), Expect = 0.003
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 292 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQG 384
G VIGIDLGTT SC+ + + ++IAN +G
Sbjct: 50 GPVIGIDLGTTTSCLAIMEGQTPKVIANAEG 80
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 73.7 bits (173), Expect = 3e-14
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Frame = +2
Query: 386 NRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQTVQH-DVKFFPF 562
NR TPS V++ + R +G+AAK+ +N NTV KRL GR + D ++ + F
Sbjct: 36 NRSTPSLVSYGERS-RFLGEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIKDIESNFISA 94
Query: 563 KVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFND 742
K+ E + +VQ + F+ ++ A TK+K AEA L V+ V+++PA+F D
Sbjct: 95 KLTEVDGFVGAKVQYLNEETAFSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTD 154
Query: 743 AQRQA 757
QR+A
Sbjct: 155 IQRRA 159
Score = 27.5 bits (58), Expect = 2.7
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 298 VIGIDLGTTYSCVGVYKNGRVEIIAND 378
V+GID G + + + V +N +++I N+
Sbjct: 7 VVGIDFGNSKTVIAVARNRAIDVIVNE 33
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 763 DAGTISGLNVMRIINEPTAAAI 828
+A I+GLN +R++N+ AAA+
Sbjct: 162 EAANIAGLNPLRLMNDNAAAAL 183
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 62.5 bits (145), Expect = 8e-11
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Frame = +2
Query: 386 NRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQTVQH-DVKFFPF 562
NR PS +++ D E G A+ QL N +N+V + + L+G+ + T+ H P
Sbjct: 55 NRQIPSILSYHGDQE-YHGVQARGQLVRNADNSVTNFRDLLGKSHDELTLHHCHYSANPV 113
Query: 563 KVVEK-NSKPHVQV--QTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY 733
V + K VQ ++ +K+ E S L ++ E+AE +LG KV V++VP Y
Sbjct: 114 NVEGQIGFKITVQEDEESDPKEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVY 173
Query: 734 FNDAQRQA 757
F DAQR+A
Sbjct: 174 FTDAQRKA 181
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 295 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGKPHHTFIRGLH 417
TVIGI G S + ++G+ +++AN++G I H
Sbjct: 25 TVIGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYH 65
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 45.2 bits (102), Expect = 1e-05
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +2
Query: 401 SYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQT-VQHDVKFFPFKVVEK 577
S VAF + ER+ G A N T P +++ + K L+ + VQ +P + +
Sbjct: 59 SAVAF-KGNERIFGVDASNLATRFPAHSIRNVKELLDTAGLESVLVQKYQSSYPAIQLVE 117
Query: 578 NSKPHVQVQTSQGDKV-FAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQR 751
N + + D+ ++ EEI AM + AE +K+T V+TVP +FN+ QR
Sbjct: 118 NEETTSGISFVISDEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQR 176
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 298 VIGIDLGTTYSCVGVYKNGRVEIIANDQGKPHHTFI 405
V G LG TY+ V ++G VE+ D HT I
Sbjct: 1277 VNGCFLGNTYAFASVTQDGSVEVHRLDVNNQRHTLI 1312
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 27.1 bits (57), Expect = 3.6
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Frame = +2
Query: 353 DV*KSLPMTRXNRITPSYVAFTQDGERLIGDAAKNQLTTN-PENTVFDAKRLIGREWSDQ 529
D K T ITP YV+ Q+ R+ D A T N + ++++ S
Sbjct: 495 DFGKLATYTSQQNITPDYVSLLQNLVRVNPDQAAEFATQMFNSNPSINLEKIVDIFMSQN 554
Query: 530 TVQHDVKFFPFKVVEKNSK-PHVQVQTSQGDKVFAPEEISAMVLTKM 667
VQ F + + N + H+Q + + + + AP+ A++ +M
Sbjct: 555 LVQQATAFLLDALKDDNPEHSHLQTRLLEINLINAPQVADAILGNQM 601
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 429 SPS*VKATYEGVMRFXLVIGNDFYTSI 349
+PS AT +G+ R+ +IGN Y I
Sbjct: 708 NPSSKSATIDGLQRYTSMIGNQIYEGI 734
>SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 26.2 bits (55), Expect = 6.3
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +2
Query: 332 VSVSTKMDV*-KSLPMTRXNRITPSYVAFT----QDGERLIGDAAKNQLTTNPENTVFDA 496
V ++ +D+ + LP R ITP ++FT Q+ +I K TT+ +N F
Sbjct: 316 VGIANALDMTDRFLPRLRTKHITPKLLSFTPYTAQEISTIIKARLKTAATTSEKNNPFTP 375
Query: 497 KRLIGREWSDQTV 535
+ I E SD ++
Sbjct: 376 IKSIS-EVSDDSI 387
>SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1136
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 741 MLNVKQQRCWYN 776
M+NV+ Q CWYN
Sbjct: 1010 MINVESQPCWYN 1021
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,358,554
Number of Sequences: 5004
Number of extensions: 65511
Number of successful extensions: 209
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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