Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_A07
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0486 - 6404315-6404333,6404803-6405260                           30   2.8  
06_03_0857 + 25443251-25444429                                         29   4.9  
05_03_0200 + 9752625-9753182                                           29   4.9  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.5  

>04_01_0486 - 6404315-6404333,6404803-6405260
          Length = 158

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 29/95 (30%), Positives = 39/95 (41%)
 Frame = -3

Query: 756 RGXXGEKRPRFRGGEKGRTRXPGKRQGRXQESARGXFQGETPGIXXSPVGFRPPLT*ASI 577
           RG  G +R    GG   R R    + G  ++ ARG   GE   +  SP G  PPL     
Sbjct: 46  RGGGGGRRGGASGGRGRRGRQRAAQGGGGRQRARGG--GEVAVV--SPPGRSPPLR---- 97

Query: 576 FVMLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLS 472
             +   G     +R +RGL    G L+  C   L+
Sbjct: 98  -QIWQEGRRRQGRRARRGLVVAGGGLVRRCGGELA 131


>06_03_0857 + 25443251-25444429
          Length = 392

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/48 (33%), Positives = 19/48 (39%)
 Frame = -3

Query: 756 RGXXGEKRPRFRGGEKGRTRXPGKRQGRXQESARGXFQGETPGIXXSP 613
           RG  G  R R RGG +G  R  G+   R         Q  TP    +P
Sbjct: 251 RGERGRGRGRGRGGGRGGRRGRGRTPARVVAEDSPMLQATTPAAAPAP 298


>05_03_0200 + 9752625-9753182
          Length = 185

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 756 RGXXGEKRPRFRGGEKGRTRXPGKRQGR 673
           RG    +RP  R G++G  R P +R+G+
Sbjct: 88  RGRWWRRRPALRQGDRGGWRRPARRKGK 115


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 310 NESAN---ARGEAVCVLGALPLPRSLTRCAR 393
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,430,279
Number of Sequences: 37544
Number of extensions: 368363
Number of successful extensions: 1140
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)