Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_A05
         (974 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   2.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   3.2  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   9.7  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 13/42 (30%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
 Frame = +1

Query: 778 PAQTKXGXPPXPXXGGXPPPPHNXXXXPPXTXHP-PRXXPPP 900
           P  T+    P     G  P PH     P     P P   PPP
Sbjct: 7   PIITQQSQQPSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPP 48



 Score = 23.4 bits (48), Expect = 3.2
 Identities = 13/44 (29%), Positives = 14/44 (31%)
 Frame = +1

Query: 733 PXXXGXXPXRXKXXPPAQTKXGXPPXPXXGGXPPPPHNXXXXPP 864
           P      P       P   + G PP P  G   PPP      PP
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQG---PPPGGPPGAPP 56


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 13/45 (28%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
 Frame = +1

Query: 811 PXXGGXPPPPHNXXXXPPXTXHPPRXXPP--PXPQHPRXXXTGPP 939
           P   G  PP ++     P   HP R   P      H      GPP
Sbjct: 306 PSTAGFLPPSYHPHQHHPSQYHPHRGSSPHHQHGNHTMGPTMGPP 350


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 18/85 (21%), Positives = 21/85 (24%), Gaps = 3/85 (3%)
 Frame = +1

Query: 721 PXXXPXXXGXXPXRXKXXPPAQTKXGXPPXPXXGGXPPPPHNXXXXPPXTX---HPPRXX 891
           P   P      P   +   P        P       PP P       P      + P   
Sbjct: 186 PVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYI 245

Query: 892 PPPXPQHPRXXXTGPPXXRXPTXPP 966
           P P P HPR      P  +     P
Sbjct: 246 PQPRPPHPRLRREAKPEAKPGNNRP 270


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,134
Number of Sequences: 438
Number of extensions: 5307
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32169774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)