Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_A02
         (930 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0373 + 23581812-23583293                                         30   2.3  
02_04_0193 - 20801959-20802583,20803372-20803448,20803530-208036...    29   4.0  
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751...    29   5.3  
09_04_0727 + 19765175-19765384,19765523-19765595,19766476-197665...    29   7.0  
03_06_0185 + 32193769-32194617                                         28   9.2  
02_01_0406 - 2958933-2962076                                           28   9.2  

>03_05_0373 + 23581812-23583293
          Length = 493

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = -3

Query: 442 DVQGGPCGAPRPCARCSASTVPKPPW 365
           D  GG   A    +RCSAST PK PW
Sbjct: 53  DGAGGYGSAASSPSRCSASTPPKSPW 78


>02_04_0193 -
           20801959-20802583,20803372-20803448,20803530-20803646,
           20804147-20804250,20804359-20804428,20804547-20804644,
           20804747-20804840,20805269-20805359,20805453-20805545,
           20805635-20805960,20806162-20806641
          Length = 724

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = +2

Query: 257 QDFRQGLEGRLRV----RAATAQRLRQESPXQRSETRTARPRRLWN 382
           QD+R+ LE   +     R  T Q +RQE   QR   ++ + + LWN
Sbjct: 344 QDYRRKLEEEKKSVAFERGDTVQIIRQELKSQRRHVKSLKKKSLWN 389


>12_02_1035 -
           25570009-25571241,25571940-25573709,25573797-25575118,
           25575208-25575555,25576540-25576633
          Length = 1588

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/45 (33%), Positives = 28/45 (62%)
 Frame = +2

Query: 467 EKLQAAVXNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAK 601
           EKLQ  + +  QE+Q+L KK+SS V E +++   ++ +  +  A+
Sbjct: 153 EKLQKEISSLSQENQELKKKISS-VLENSDRAESEVASLKEALAQ 196


>09_04_0727 +
           19765175-19765384,19765523-19765595,19766476-19766570,
           19766666-19768450,19768533-19768721,19768816-19768958,
           19769075-19769320,19769975-19770059,19770117-19770191,
           19770304-19770369,19770466-19770712,19770824-19771242
          Length = 1210

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 251 DAQDFRQGLEGRLRVRAATAQRLRQESPXQRSETRTARPRRL 376
           D +D  +  EGR R        +R+ SP +  + RT  PRR+
Sbjct: 221 DDEDGEEEQEGRRRYDLRDRSEVRRPSPRKEGKHRTQSPRRV 262


>03_06_0185 + 32193769-32194617
          Length = 282

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 87  GRQSSVVLFAVHRSGPMERWCDATHPDFFKDIEH 188
           G+ SS  L A +  G  + WC    P FF D EH
Sbjct: 151 GKPSSFELLAYYPVGEWQ-WCSLPLPPFFDDPEH 183


>02_01_0406 - 2958933-2962076
          Length = 1047

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 126 SGPMERWCDATHPDFFKDIEHH--TKVVP*DFXNNSLXRSPSQRTH 257
           +GP+ RW D+ +  F+ D+  +  T+ +P    N  + RS S   H
Sbjct: 485 TGPIPRWIDSLNHLFYIDVSDNRLTEEIPITLMNLPMLRSTSDIAH 530


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,781,378
Number of Sequences: 37544
Number of extensions: 305889
Number of successful extensions: 952
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)