Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_A02
         (930 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr...    32   0.67 
Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
            F47A4.2 protein.
          Length = 3498

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 29/149 (19%), Positives = 55/149 (36%), Gaps = 4/149 (2%)
 Frame = +2

Query: 221  QQFXSLTKSKDAQDFRQGLEGRLRVRAATAQRLRQE----SPXQRSETRTARPRRLWNXX 388
            QQ   L + ++ +  R+  E R+R++    +R+RQE       +R   R A   R+    
Sbjct: 2623 QQRLELLRRQEEERLRKEAEERMRIQRENEERVRQEQMRLEAEERERIRRAEEERIQKEL 2682

Query: 389  XXXXXXXXXXXXXXXLHVEKNATALREKLQAAVXNTVQESQKLAKKVSSNVQETNEKLAP 568
                              ++    +RE  +A +     E Q+ +++     Q+      P
Sbjct: 2683 EDKVRREKEEAARQEKERQEQEARMREAREAELSRQRMEQQRRSQQNPYMNQQGQYSQQP 2742

Query: 569  KIKAAYDDFAKNTQXGDQEDPGRPPTAKQ 655
                    +  N Q G Q +  +PP  +Q
Sbjct: 2743 PPSYQQSSYPNNYQPGQQGN--QPPNYQQ 2769


>Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical
           protein F53F1.4 protein.
          Length = 105

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 433 GGPCGAPRPCARCSASTVPKPP 368
           GG CG P PC   + + V  PP
Sbjct: 65  GGGCGGPAPCGGAAPAYVAPPP 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,048,447
Number of Sequences: 27780
Number of extensions: 222331
Number of successful extensions: 774
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)