Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_P17
         (950 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0440 + 29401405-29401407,29401721-29401920,29402406-294024...    29   5.4  
07_01_0935 + 7905748-7905765,7906071-7906096,7906142-7906166,790...    29   7.2  

>01_06_0440 +
           29401405-29401407,29401721-29401920,29402406-29402490,
           29403038-29403121,29403853-29404147,29404228-29404322,
           29406118-29406858
          Length = 500

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
 Frame = -3

Query: 438 PAFDELG--HWLGAPRCRNKXXXXXXXXXXXLIRYFCIFHTCYSSVIDESNLAIFF*EPL 265
           P FDE+   HWL  PR                +  FC F+T  SSV++ +N A    +  
Sbjct: 366 PDFDEMDVEHWL-LPREDVVDSYLVESPETHEVTDFCSFYTLPSSVLNNANYATL--KAA 422

Query: 264 TSNATLGTAIKRVQLFYDRLILKLME*YE 178
            S   + T     QL  D LI+   + Y+
Sbjct: 423 YSYYNVSTKTPLQQLMNDALIVAKQKNYD 451


>07_01_0935 +
           7905748-7905765,7906071-7906096,7906142-7906166,
           7906891-7907700,7907803-7907934,7908102-7908470,
           7908540-7908671,7909135-7909662
          Length = 679

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
 Frame = +1

Query: 355 SWWRGRENCXLVPATRCS-QPMTEFVEGWVVAHVLGEGAYGEVRLXVH 495
           SWW    NC LV   RC   P T    G  ++H        E+ L  H
Sbjct: 503 SWWSSYGNC-LVLDKRCGVPPTTSTFSGQAISHTAASIGVREIILLAH 549


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,917,259
Number of Sequences: 37544
Number of extensions: 251275
Number of successful extensions: 615
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2741249160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)