Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_P11
         (936 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0389 - 13409848-13409964,13410049-13410114,13410209-134103...   130   2e-30
01_07_0097 + 41070877-41070942,41071039-41071104,41071189-41071305     88   1e-17
01_06_1151 + 34937738-34937855,34937959-34939244                       31   1.7  
09_04_0330 + 16731390-16731699,16731774-16732080,16732182-167335...    30   3.0  
06_01_0994 + 7719974-7721323                                           30   3.0  
05_04_0020 - 17199627-17199947,17200129-17200203,17200301-172003...    29   5.3  
05_04_0373 + 20732358-20732675,20733555-20734440,20734523-20735625     28   9.3  
03_02_0054 + 5292167-5292336,5292434-5292526,5292828-5293003,529...    28   9.3  

>05_03_0389 -
           13409848-13409964,13410049-13410114,13410209-13410325,
           13410822-13410893,13410979-13411258,13411528-13411730,
           13412230-13412316,13412705-13412758,13413042-13413221,
           13414402-13414576,13414628-13414918,13414923-13415344
          Length = 687

 Score =  130 bits (314), Expect = 2e-30
 Identities = 57/106 (53%), Positives = 76/106 (71%)
 Frame = +2

Query: 68  EPPAGVVXREGXNYNPYFPGGAISMAQVLFDEAAEYSDGTPATASQLAKDVATFLKWCSE 247
           +PPAGV  REG +YNPYFPGGAI+M ++L D A EY DGTPAT +Q+ KDV +FL W +E
Sbjct: 582 DPPAGVQIREGLHYNPYFPGGAIAMPKMLIDGAVEYEDGTPATEAQMGKDVVSFLSWAAE 641

Query: 248 PELDDRRQMTIKAIGMFSMLAAVVYYYKRHKWSTLKSRKLAYKPVS 385
           PE+++R+ M +K I + S+      YY+R +WS LKSRKL    V+
Sbjct: 642 PEMEERKLMGVKWIFLLSLALLQAAYYRRMRWSVLKSRKLVLDVVN 687


>01_07_0097 + 41070877-41070942,41071039-41071104,41071189-41071305
          Length = 82

 Score = 87.8 bits (208), Expect = 1e-17
 Identities = 39/82 (47%), Positives = 54/82 (65%)
 Frame = +2

Query: 140 MAQVLFDEAAEYSDGTPATASQLAKDVATFLKWCSEPELDDRRQMTIKAIGMFSMLAAVV 319
           M ++L D A EY DGTPAT +Q+ KDV +FL W +EPE+++R+ M +K I + S+     
Sbjct: 1   MPKMLIDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGVKWIFLLSLALLQA 60

Query: 320 YYYKRHKWSTLKSRKLAYKPVS 385
            YY+R KWS  KSRKL    V+
Sbjct: 61  AYYRRMKWSVYKSRKLVLDVVN 82


>01_06_1151 + 34937738-34937855,34937959-34939244
          Length = 467

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = -1

Query: 264 RSSSSGSEHHFKKV--ATSLASCDAVAGVPSLYSAASSNRTCAIEMAPPGKYGL*LXPSR 91
           R+ ++G +HH + V   T    CD  + +  L +A S+NR   +E    G+      P+ 
Sbjct: 329 RARAAGRKHHCRAVLGGTPFVVCDKCSEILQLPAAVSANRAARLECGGCGETLSIKLPAA 388

Query: 90  XTTPAGGS 67
               A GS
Sbjct: 389 AAAAASGS 396


>09_04_0330 +
           16731390-16731699,16731774-16732080,16732182-16733561,
           16734064-16734112
          Length = 681

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = -2

Query: 131 HLLGSMD-CSXVPHVALHQQEVPM 63
           H+LGSM  C  VPH++   QE+PM
Sbjct: 258 HVLGSMPLCVLVPHLSCFSQELPM 281


>06_01_0994 + 7719974-7721323
          Length = 449

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 288 IALMVICRRSSSSGSEHHFKKVATSLASCDAVAGVPSLYSAASSNRTCA 142
           ++  V+ R  +SSG  H  + +A +   CDA+ G+  + S  SS  T A
Sbjct: 243 VSAAVVLRELASSGDRHALEAIARAHGMCDALVGL--VTSPVSSQATKA 289


>05_04_0020 -
           17199627-17199947,17200129-17200203,17200301-17200384,
           17200483-17200562,17201354-17201508,17202602-17203215
          Length = 442

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = +2

Query: 107 YNPYFPGGAISMAQVLFDEAAEYSDGTPATASQLAKDVATFLKWCSEPELDDRRQ 271
           + P F    + +A  +F  A  YS  TPA A+  +       ++  EP +  R+Q
Sbjct: 50  HRPLFALAGMLVAAAIFSLATPYSSSTPAAAAAGSTAANPLARFSVEPAVSRRQQ 104


>05_04_0373 + 20732358-20732675,20733555-20734440,20734523-20735625
          Length = 768

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 376 LVGELSRLERGPLVPLVVVDNGGKHGEHADSFDGH 272
           +  E +R +  P V  VVV+  G  GE AD   GH
Sbjct: 15  IADEAARRDGSPPVDAVVVEGAGTSGEDADWPSGH 49


>03_02_0054 +
           5292167-5292336,5292434-5292526,5292828-5293003,
           5293076-5293122,5293732-5293801,5293960-5294186,
           5294274-5294327,5294470-5294545,5294679-5294884
          Length = 372

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 193 RRRAVTVLSCFVK*NLRHRDGTSWEVWIVVXSLTXHYTSRRFQC 62
           RR +V+ +S F+  NLR  D  S   W++   L     SR F+C
Sbjct: 168 RRASVSSISSFLS-NLRSHDQISSIFWLIHSDLHEPKFSRAFEC 210


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,297,233
Number of Sequences: 37544
Number of extensions: 398884
Number of successful extensions: 879
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)