Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_P11
         (936 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75533-7|CAA99820.1|  285|Caenorhabditis elegans Hypothetical pr...   123   2e-28
Z81575-9|CAB04635.1|  130|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z78065-9|CAI79172.1|  273|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z78064-11|CAI79210.1|  273|Caenorhabditis elegans Hypothetical p...    28   8.3  

>Z75533-7|CAA99820.1|  285|Caenorhabditis elegans Hypothetical
           protein C54G4.8 protein.
          Length = 285

 Score =  123 bits (296), Expect = 2e-28
 Identities = 58/112 (51%), Positives = 71/112 (63%)
 Frame = +2

Query: 65  LEPPAGVVXREGXNYNPYFPGGAISMAQVLFDEAAEYSDGTPATASQLAKDVATFLKWCS 244
           LE PAGV   +G  YNPYFPGG ISM Q LFDE  EY DGTPAT SQ AKDV+ F+ W +
Sbjct: 171 LEAPAGVKVDDGKAYNPYFPGGIISMPQQLFDEGIEYKDGTPATMSQQAKDVSAFMHWAA 230

Query: 245 EPELDDRRQMTIKAIGMFSMLAAVVYYYKRHKWSTLKSRKLAYKPVSKK*TP 400
           EP  D R++  +K   +   +A V+ Y KRH WS  KS+K  +K V  +  P
Sbjct: 231 EPFHDTRKKWALKIAALIPFVAVVLIYGKRHIWSFTKSQKFLFKTVKGREPP 282


>Z81575-9|CAB04635.1|  130|Caenorhabditis elegans Hypothetical
           protein R08H2.10 protein.
          Length = 130

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 660 DHLTLQFDCATASQWQNAINIIT 592
           DH+TL FDCAT SQ +  +  +T
Sbjct: 26  DHVTLSFDCATTSQKKITLKNVT 48


>Z78065-9|CAI79172.1|  273|Caenorhabditis elegans Hypothetical
           protein F57B1.8 protein.
          Length = 273

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 485 INLFYLPSRVYFVTRGGLL*LCYHAWSRRRETVL 586
           I+ F L S V  +  GG L LC+  WSR ++  L
Sbjct: 6   ISSFVLSSLVSTILTGGFLVLCFILWSRFKQVRL 39


>Z78064-11|CAI79210.1|  273|Caenorhabditis elegans Hypothetical
           protein F57B1.8 protein.
          Length = 273

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 485 INLFYLPSRVYFVTRGGLL*LCYHAWSRRRETVL 586
           I+ F L S V  +  GG L LC+  WSR ++  L
Sbjct: 6   ISSFVLSSLVSTILTGGFLVLCFILWSRFKQVRL 39


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,903,763
Number of Sequences: 27780
Number of extensions: 338047
Number of successful extensions: 857
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)