Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_P02
         (905 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical p...    31   1.5  
Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical pr...    31   1.5  
AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic catio...    31   1.5  
AF098986-1|AAC67425.1|  747|Caenorhabditis elegans T box family ...    29   3.5  
AF022974-7|AAC48042.2|  293|Caenorhabditis elegans Serpentine re...    29   3.5  
Z81583-5|CAB04673.1|  574|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical
           protein F52F12.1a protein.
          Length = 585

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 744 IAFILCFRFRGXCGRVFSALM 806
           I FI+C  F G  GR+FS LM
Sbjct: 225 IPFIICMEFMGNSGRIFSGLM 245


>Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical
           protein F52F12.1b protein.
          Length = 568

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 744 IAFILCFRFRGXCGRVFSALM 806
           I FI+C  F G  GR+FS LM
Sbjct: 208 IPFIICMEFMGNSGRIFSGLM 228


>AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic cation
           transporter 1 protein.
          Length = 568

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 744 IAFILCFRFRGXCGRVFSALM 806
           I FI+C  F G  GR+FS LM
Sbjct: 208 IPFIICMEFMGNSGRIFSGLM 228


>AF098986-1|AAC67425.1|  747|Caenorhabditis elegans T box family
           protein 31 protein.
          Length = 747

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -3

Query: 384 YILKLTSRLNNTSIYGSRFKDHFPIALAEPRTSIAGPALTIP 259
           ++L L+  L   S Y    K HFP       TS+ GPA+ IP
Sbjct: 612 HLLNLSHHLCRFSEYNLFVKAHFPRGSYGSLTSMTGPAVEIP 653


>AF022974-7|AAC48042.2|  293|Caenorhabditis elegans Serpentine
           receptor, class sx protein9 protein.
          Length = 293

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
 Frame = +3

Query: 669 LFVKFGD-AIALFVTIIXCNKQVNTTIAFILCFR--FRGXC--GRVFSALMNRPTPGERG 833
           LF+ FG    +LF+ +I   KQ+ T  + + CF+  F+  C  G +F  ++N      R 
Sbjct: 17  LFIVFGTIGNSLFIHLIFKRKQLQTRTSVLQCFQCSFQTFCLFGTLFDGIINLGHSFNRR 76

Query: 834 FXYW 845
             +W
Sbjct: 77  ECFW 80


>Z81583-5|CAB04673.1|  574|Caenorhabditis elegans Hypothetical
           protein T02G6.5 protein.
          Length = 574

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 737 VNLFIAXYNGYK*SNSITKFHK*SIFFTAF*LWFVQT 627
           +N F +   GYK    + K+   SIF+TAF   F QT
Sbjct: 36  INFFSSSLTGYKGFKKLCKYILFSIFYTAFSNTFRQT 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,191,144
Number of Sequences: 27780
Number of extensions: 295031
Number of successful extensions: 596
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)