Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_P01
(906 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0431 - 10152228-10152352,10152688-10152919,10153602-101538... 32 0.72
01_01_0545 - 4002659-4003307,4003415-4003887 31 1.3
11_02_0138 - 8708483-8709033,8709163-8709265,8709312-8709359,871... 30 2.2
10_05_0077 + 8885776-8886057,8886207-8886464 29 5.1
04_03_0498 + 16574250-16574312,16576576-16577457,16578624-165787... 29 5.1
03_01_0206 - 1625020-1625619,1625722-1625931,1626054-1626094,162... 29 5.1
02_02_0429 - 10135695-10135769,10135872-10135972,10138416-101385... 29 5.1
07_03_1424 - 26474464-26474514,26474549-26474635,26474905-264750... 28 8.9
>02_02_0431 -
10152228-10152352,10152688-10152919,10153602-10153808,
10153915-10154034,10154114-10154260,10155080-10155147,
10155502-10155667,10156765-10156914,10157219-10157335,
10158177-10158281,10159050-10159147,10159594-10159763,
10161489-10161511,10161927-10162006,10162191-10162259,
10163198-10163442,10163614-10163810
Length = 772
Score = 31.9 bits (69), Expect = 0.72
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Frame = +2
Query: 167 IPVYVSEQYPKGLGHTTKDIK---LEDAALVYE------KTKFSMYTPELQERLXKDVPE 319
+ ++ Y G G T K +K L D ++ E KT+FS + + + K
Sbjct: 666 VEIFRRRYYSGGKGPTVKGLKGADLADGLVIKEGEYKLVKTRFSAFFATPLDSVLK-TSG 724
Query: 320 LGSVVLFGIEAHVCIEQTVIDLLSRDI-AVHVLADGVSS 433
+ +V+ G++ CI QTV D ++ D V V+ D ++
Sbjct: 725 IKKLVIVGVQTPNCIRQTVFDAVALDYEKVTVIIDATAA 763
>01_01_0545 - 4002659-4003307,4003415-4003887
Length = 373
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 589 RIWR*SVKNYNIFCEEINDFFKK*YVKIAPNYLRLFVRLTVIEGTD 726
R+W S +Y +FC+ + +F K+ ++A LRLF+R + G +
Sbjct: 145 RLWPKSGDDYLLFCDVMEEFHKE-MRRLADELLRLFLRALGLTGEE 189
>11_02_0138 -
8708483-8709033,8709163-8709265,8709312-8709359,
8713887-8714359,8716353-8716508,8716572-8716617,
8716657-8716713
Length = 477
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 362 IEQTVIDLLSRDIAVHVLADGVSSRSLMDRGLALQRL-QSIGCFVGTSENVLFKLLKDKN 538
+ T + R+++ + LA G++ +A+ + SIGC SE +FK + D
Sbjct: 160 VASTAAGSVVRNVSFYGLASGIAQGGAPKAHIAVYKACWSIGC----SEATIFKAIDDAI 215
Query: 539 HPAFKQISKLNVTPTAH 589
H +S ++PT H
Sbjct: 216 HDGVDVLSLSILSPTGH 232
>10_05_0077 + 8885776-8886057,8886207-8886464
Length = 179
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 146 EAAKHFKIPVYVSEQYPKGLGHTTKDIKLEDAALVYEKTKFSMYTPELQER 298
+A H +P +V+E YPK T + +++ + E T+F++ P R
Sbjct: 75 DALSH-DVPAHVNELYPKADKETIDEQTIKNNRSIIEDTRFNVENPPKNRR 124
>04_03_0498 +
16574250-16574312,16576576-16577457,16578624-16578714,
16578802-16578857,16579527-16579640
Length = 401
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -1
Query: 522 SLKRTFSEV-PTKQPMDWRRCRANPLSIRDLEETPSASTCTAISRLNK 382
SL SEV +K P++ +RCR N DLE TP+A + SRL++
Sbjct: 180 SLAAVVSEVLVSKAPLE-KRCRTNLQETGDLENTPNAHV-SKRSRLHR 225
>03_01_0206 -
1625020-1625619,1625722-1625931,1626054-1626094,
1626185-1626234,1626345-1626433,1626534-1626608,
1626721-1626806,1626896-1626956,1627090-1627206,
1627308-1627549,1627983-1628040,1628162-1628284
Length = 583
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 567 NLEICLKAG*FLSFKSLKRT-FSEVPTKQPMDWRRCRANPLSIRDLEE 427
NL +CL+ G ++K+T F E K M+WR+ +RD +E
Sbjct: 449 NLSVCLQMG-----SNMKKTIFEEQTMKALMNWRKTAREKKKLRDADE 491
>02_02_0429 -
10135695-10135769,10135872-10135972,10138416-10138532,
10138810-10139041,10142326-10142442,10142762-10142827
Length = 235
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 224 IKLEDAALVYEKTKFSMYTPELQERLXKDVPELGSVVLFGIEAHVCIEQTVIDLLSRDI- 400
+ ++D KT+FS + + + K + ++V+ G++ CI QTV D ++ D
Sbjct: 101 LTIKDGDYKLVKTRFSAFFATHLDSVLK-TSGIKNLVIVGVQTPNCIRQTVFDAVALDYD 159
Query: 401 AVHVLADGVSS 433
V V+ D ++
Sbjct: 160 KVAVIIDATAA 170
>07_03_1424 -
26474464-26474514,26474549-26474635,26474905-26475006,
26475149-26475260,26475405-26475463,26475559-26475633,
26475734-26475832,26476128-26476343,26476426-26476500,
26476583-26476670,26476757-26476902,26477240-26477347,
26477417-26478436,26478437-26478715,26479471-26480520,
26480636-26480692,26480780-26480837,26481379-26481458,
26481598-26481654,26481764-26481833,26481967-26482202,
26482341-26482445,26482534-26482680,26482758-26482823,
26482916-26482979,26484040-26484200,26484308-26484400,
26484487-26484600,26484684-26484803,26484893-26484976,
26485061-26485216,26485389-26485811
Length = 1885
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -1
Query: 327 EPNSGTSXFKRSCNSGVYIENLVFSYTKAASSNLMSLV 214
EP+S + GVY+ENL+ Y + +M L+
Sbjct: 292 EPSSTNLQIREDIKKGVYVENLMECYVSSVKDVMMLLL 329
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,790,757
Number of Sequences: 37544
Number of extensions: 353581
Number of successful extensions: 845
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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