Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_P01
         (906 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69637-2|CAA93466.1|  199|Caenorhabditis elegans Hypothetical pr...   127   9e-30
Z81044-11|CAB02809.2|  476|Caenorhabditis elegans Hypothetical p...    31   0.86 
AF067211-6|AAC16989.1|  308|Caenorhabditis elegans Serpentine re...    29   4.6  
AF067211-5|AAW88420.1|  329|Caenorhabditis elegans Serpentine re...    29   4.6  

>Z69637-2|CAA93466.1|  199|Caenorhabditis elegans Hypothetical
           protein F35G2.2 protein.
          Length = 199

 Score =  127 bits (307), Expect = 9e-30
 Identities = 65/147 (44%), Positives = 93/147 (63%), Gaps = 2/147 (1%)
 Frame = +2

Query: 143 LEAAKHFKIPVYVSEQYPKGLGHTTKDIK--LEDAALVYEKTKFSMYTPELQERLXKDVP 316
           ++AA+   IP  V+EQYPKGLGHT   +K  L +   +++KTKFSM  P  ++ L K   
Sbjct: 44  IDAARILSIPTIVTEQYPKGLGHTVPTLKEGLAENTPIFDKTKFSMCIPPTEDTLKK--- 100

Query: 317 ELGSVVLFGIEAHVCIEQTVIDLLSRDIAVHVLADGVSSRSLMDRGLALQRLQSIGCFVG 496
            + +V+L GIEAHVC+ QT  DLL R + VHV+ D VSSRS  DR  A ++++  G  + 
Sbjct: 101 -VQNVILVGIEAHVCVLQTTYDLLERGLNVHVVVDAVSSRSHTDRHFAFKQMEQAGAILT 159

Query: 497 TSENVLFKLLKDKNHPAFKQISKLNVT 577
           TSE  +  L+   +HP FK++ KL +T
Sbjct: 160 TSEATILGLVGGSDHPKFKEVQKLILT 186


>Z81044-11|CAB02809.2|  476|Caenorhabditis elegans Hypothetical
           protein C30H6.4 protein.
          Length = 476

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = -1

Query: 477 DWRRCRANPLSIRDLEETPSASTCTAISRLNKSMTVCSIHT---*ASIPNKTTEPNSGTS 307
           +W++C   P + +    TP+ +T T I     S T  S  T     +    TTEP + TS
Sbjct: 247 EWKKCGLVPETTKPTTTTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTS 306


>AF067211-6|AAC16989.1|  308|Caenorhabditis elegans Serpentine
           receptor, class z protein85, isoform a protein.
          Length = 308

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = -3

Query: 211 VTETFGVLLGHVDWYFEMFRCL*LILLYYEQPFLLLXIXI 92
           V E  G+ L    W+   F  + +I+++Y+  +++L I +
Sbjct: 141 VNELIGIFLYWAHWFILSFEVIDVIIIFYQTAYMILNIIL 180


>AF067211-5|AAW88420.1|  329|Caenorhabditis elegans Serpentine
           receptor, class z protein85, isoform b protein.
          Length = 329

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = -3

Query: 211 VTETFGVLLGHVDWYFEMFRCL*LILLYYEQPFLLLXIXI 92
           V E  G+ L    W+   F  + +I+++Y+  +++L I +
Sbjct: 162 VNELIGIFLYWAHWFILSFEVIDVIIIFYQTAYMILNIIL 201


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,205,980
Number of Sequences: 27780
Number of extensions: 348205
Number of successful extensions: 748
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)