Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_O24
(1200 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0610 - 25449085-25453284 33 0.59
12_02_0299 - 17051570-17052474,17053542-17053755 26 1.4
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 25 3.5
01_06_1808 - 40023533-40023966,40024078-40024204 30 4.2
04_03_0904 + 20717005-20718087 29 5.5
03_06_0212 + 32400982-32402055 29 5.5
02_05_0686 - 30900748-30902167,30903442-30904742 29 5.5
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 7.3
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 24 8.1
02_03_0279 + 17250347-17252098 24 8.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 26 9.8
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 32.7 bits (71), Expect = 0.59
Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Frame = +2
Query: 374 IKTXXXNKKKSPPXXLQ---KXXKRRDXPXXXHXTPPKXVPWXKXPPQGXPTKKETPKGN 544
+ + K SPP + P +PP P PP+G TP+ +
Sbjct: 847 VSSPPPEKSSSPPPEAHVSSPPPPEKSPPPPETKSPPTLTPEISPPPEGKSPPSHTPESS 906
Query: 545 TPPNXKXXSP 574
+PP+ + P
Sbjct: 907 SPPSKESEPP 916
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 404 SPPXXLQKXXKRRDXPXXXHXTPPKXVPWXKXPPQGXPTKKETPKGNTP 550
SPP K P H +PP + PP+ P ++++P ++P
Sbjct: 738 SPPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPEEKSPPPHSP 786
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 25.8 bits (54), Expect(2) = 1.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 46 PXPPPPPGXFXXFPP 2
P PPPPP FPP
Sbjct: 326 PPPPPPPSFPWPFPP 340
Score = 24.2 bits (50), Expect(2) = 1.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -3
Query: 76 FXXXPNXWGXPXPPPPP 26
F P+ + P PPPPP
Sbjct: 310 FPPLPSFYPSPPPPPPP 326
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 25.0 bits (52), Expect(2) = 3.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 52 GXPXPPPPPG 23
G P PPPPPG
Sbjct: 940 GPPPPPPPPG 949
Score = 23.4 bits (48), Expect(2) = 3.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 64 PNXWGXPXPPPPP 26
P G P PPPPP
Sbjct: 935 PGKPGGPPPPPPP 947
>01_06_1808 - 40023533-40023966,40024078-40024204
Length = 186
Score = 29.9 bits (64), Expect = 4.2
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 3 GGKXXKXPGGGGGXGXPHXLGXXXNPPK 86
GGK K P GGGG G G N PK
Sbjct: 34 GGKSGKKPQGGGGGGGEGGGGAAENKPK 61
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.5 bits (63), Expect = 5.5
Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Frame = +2
Query: 335 PKKXTTXKXXXXSIKTXXXNKKKSPPXXLQKXXKRRDXPXXXHXTPP-KXVPWXKXPPQG 511
PK T + + K +PP + K P P K P PP
Sbjct: 202 PKPTPTPYTPTPTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKPAPPTYKPQPKPNPPPTY 261
Query: 512 XPTKKETPKGNTPPNXK 562
P K TP TPP K
Sbjct: 262 KPQPKPTPTPYTPPTYK 278
>03_06_0212 + 32400982-32402055
Length = 357
Score = 29.5 bits (63), Expect = 5.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 4 GGKXKXXRGGGGGXXIPTXWXVXG 75
GG+ K RGGGGG + W G
Sbjct: 15 GGRGKRGRGGGGGEMVEAVWGQTG 38
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 99 PXPKFXGDSXNXPXGGDXPXPPPPPXXFXFSPP 1
P P G P G P PPPPP PP
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPP 378
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.1 bits (62), Expect = 7.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 52 GXPXPPPPPGXFXXFPP 2
G P PPPPPG PP
Sbjct: 1107 GAPPPPPPPGGITGVPP 1123
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 23.8 bits (49), Expect(2) = 8.1
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 45 PXPPPPPXXFXFSPP 1
P PPPPP SPP
Sbjct: 79 PPPPPPPPRNSPSPP 93
Score = 23.4 bits (48), Expect(2) = 8.1
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -1
Query: 75 SXNXPXGGDXPXPPPPP 25
S P P PPPPP
Sbjct: 68 SATPPLAASPPPPPPPP 84
>02_03_0279 + 17250347-17252098
Length = 583
Score = 24.2 bits (50), Expect(2) = 8.1
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -1
Query: 93 PKFXGDSXNXPXGGDXPXPPPPP 25
P DS P PPPPP
Sbjct: 109 PTLIDDSPQQAAAASPPPPPPPP 131
Score = 23.0 bits (47), Expect(2) = 8.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1
Query: 45 PXPPPPPXXFXFSPP 1
P PPPPP F+ P
Sbjct: 127 PPPPPPPPPPLFAKP 141
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 25.8 bits (54), Expect(2) = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 99 PXPKFXGDSXNXPXGGDXPXPPPPP 25
P P S N P P PPPPP
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPPPPPP 571
Score = 21.0 bits (42), Expect(2) = 9.8
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 45 PXPPPPPXXFXFSPP 1
P PPP P SPP
Sbjct: 589 PPPPPLPNCLVPSPP 603
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.135 0.428
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,869,253
Number of Sequences: 37544
Number of extensions: 284443
Number of successful extensions: 2050
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1811
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3666490380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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