Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_O10
         (933 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   3.0  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   3.0  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   3.0  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   3.0  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   4.0  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   4.0  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   5.2  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   9.2  

>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -2

Query: 806 DDVSTLAR*MVYRGKPSSATVLNVRQMYASMSLVFIQSLTRFESSSVQ 663
           DD STL R  V   +P + T+L      A   +  + +L     +S Q
Sbjct: 103 DDYSTLIRVRVIDVRPQNETILTTVSSEADSDVTTLPTLIGKNETSTQ 150


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -2

Query: 806 DDVSTLAR*MVYRGKPSSATVLNVRQMYASMSLVFIQSLTRFESSSVQ 663
           DD STL R  V   +P + T+L      A   +  + +L     +S Q
Sbjct: 151 DDYSTLIRVRVIDVRPQNETILTTVSSEADSDVTTLPTLIGKNETSTQ 198


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -2

Query: 806 DDVSTLAR*MVYRGKPSSATVLNVRQMYASMSLVFIQSLTRFESSSVQ 663
           DD STL R  V   +P + T+L      A   +  + +L     +S Q
Sbjct: 151 DDYSTLIRVRVIDVRPQNETILTTVSSEADSDVTTLPTLIGKNETSTQ 198


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -2

Query: 806 DDVSTLAR*MVYRGKPSSATVLNVRQMYASMSLVFIQSLTRFESSSVQ 663
           DD STL R  V   +P + T+L      A   +  + +L     +S Q
Sbjct: 151 DDYSTLIRVRVIDVRPQNETILTTVSSEADSDVTTLPTLIGKNETSTQ 198


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 462 NLYSYRCWQIDLLHRREKPEIHLQIH 385
           N   Y C ++DLL +RE     +QI+
Sbjct: 224 NTGEYSCLKVDLLFKREFSYYLIQIY 249


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 462 NLYSYRCWQIDLLHRREKPEIHLQIH 385
           N   Y C ++DLL +RE     +QI+
Sbjct: 224 NTGEYSCLKVDLLFKREFSYYLIQIY 249


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 292 PVLSHQRYSPCCIE 333
           P   H++Y PCC E
Sbjct: 207 PAERHKKYYPCCDE 220


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +1

Query: 562 SYGKILKMPFMGLHPD*PVLGLANKGVTTYFSSNCTEEDSNL 687
           +YG+ +   ++ L+P    +     GV+ + SS  T E   +
Sbjct: 210 NYGRRINCTYVALYPSSVQVIALGVGVSNFLSSTRTAETGTI 251


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,895
Number of Sequences: 438
Number of extensions: 5272
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30476628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)