Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_O09
(892 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.15c |cog1||Golgi transport complex subunit Cog1 |Schizos... 31 0.22
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 29 0.89
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 28 2.1
SPBC2A9.11c ||SPBC2D10.01c|nuclear export factor|Schizosaccharom... 28 2.1
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 28 2.1
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 28 2.1
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 28 2.1
SPCC23B6.01c |||oxysterol binding protein |Schizosaccharomyces p... 27 2.7
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 27 3.6
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 27 3.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 3.6
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 4.7
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 26 6.3
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 26 6.3
SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein Usp106|Sch... 26 8.3
>SPAC144.15c |cog1||Golgi transport complex subunit Cog1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 701
Score = 31.1 bits (67), Expect = 0.22
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +2
Query: 518 VNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKTYEIQKEFEK 691
+N+ ++ +++ +DH +TF++E + L T + E D + E +Q EF K
Sbjct: 609 LNLERLKAAKSMDHMKQNTFDMEFINYLSDFTNNPREVIDYQHFIELIDLHVQDEFSK 666
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 29.1 bits (62), Expect = 0.89
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +2
Query: 449 KRRELERLRHLATKQFELTNDLHVNMGKVP-----SSEHLDHTNAHTFEIEDLKKLIMKT 613
++R+ +L +L K F L + NM +V S + ++ + +T EIE LK+
Sbjct: 224 EKRDSAQLVYLLWKLFHLEKSISSNMAEVTRLKADSIQLIERRDENTKEIEKLKEKEGSI 283
Query: 614 TSDLEAADKKRREEFK 661
+L A D+K R++ K
Sbjct: 284 RRNLLAFDRKVRKQEK 299
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 27.9 bits (59), Expect = 2.1
Identities = 24/69 (34%), Positives = 30/69 (43%)
Frame = +2
Query: 347 KRLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNM 526
KRLEK+DE K + E L + NV L E R E++ L Q E +
Sbjct: 130 KRLEKSDETVCKLKEENENLQDMLRNVGNELVE-SRDEIKELIEKQKVQKESVKSHESEL 188
Query: 527 GKVPSSEHL 553
V SSE L
Sbjct: 189 SSVMSSEIL 197
>SPBC2A9.11c ||SPBC2D10.01c|nuclear export
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 27.9 bits (59), Expect = 2.1
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Frame = +2
Query: 440 DEIKRRELE-RLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTT 616
+E + ELE ++ L ++Q+E+ N +V+ + TNA IED K+ + K
Sbjct: 25 EENSQPELEDEVKLLISRQYEMGNIWNVDWSSMNLESLRKLTNAQNTIIEDKKRKVEKPV 84
Query: 617 --------SDLEAADKKRREEFKTYEIQKEFEKHQKMEEMGDN 721
S+ + DKK + + +E + + K EE+ N
Sbjct: 85 SGNQFSLLSEEDEVDKKEKRR-RRFENGSRSQNNAKSEELKVN 126
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 521 NMGKVPSSEHLDHTNAHTFEIEDLKKLIMK-TTSDLEAADKKRREEFKTYEIQKEFEKHQ 697
N ++ E+ D +N E+ED + + ++SD +A ++R E T + EK +
Sbjct: 148 NSHELSDEENSDSSNEREEEVEDDNRSVESYSSSDYQARSRRRFSEETTQRRAEIKEKRK 207
Query: 698 KMEE 709
K +E
Sbjct: 208 KRKE 211
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1811
Score = 27.9 bits (59), Expect = 2.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 257 KLRMIWRSIWSIIGT 301
++RM W SIWS++GT
Sbjct: 1207 RIRMEWSSIWSLLGT 1221
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.9 bits (59), Expect = 2.1
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Frame = +2
Query: 350 RLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELT---NDLHV 520
++E+ D+E ++ ++ ++L + E +++ +RHL ++ + NDL
Sbjct: 238 KVEELDQEITETARLQDEL--------FKSTEEYEQQMITIRHLESQSDIINTTINDLKS 289
Query: 521 NMGKVP-SSEHLD--HTN--AHTFEIEDLKKLIMKTTSDLEAADKKRREEFKTY-----E 670
M SSE L+ H+N E ++L K + K SDLE+ K RRE + +
Sbjct: 290 QMTITDESSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLEKLTGDLGK 349
Query: 671 IQKEFEKHQKME 706
IQ E E +K++
Sbjct: 350 IQGEIESLEKLK 361
>SPCC23B6.01c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 27.5 bits (58), Expect = 2.7
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Frame = +2
Query: 287 SIIGTSRRLCKHWRVILISGKRLEKADEEDVKSGKIAEQLDFVNHNV----RTRLDEIKR 454
SI G +R+ + ISGK + E VK+G+ LD H+V L+E
Sbjct: 252 SIAGKVKRVSTGEVLYKISGKWDSEMSVESVKTGETRPLLDVSKHDVYLVSARPLEEQGE 311
Query: 455 RELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLK 595
RE +RL + T Q + D + E A EIE+++
Sbjct: 312 RESQRLWY-KTCQAVIARDQTTATETKSAIEDRQREEAKQREIENVQ 357
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +3
Query: 102 SNENCHYLHVDLVVLAKLTHQYEALS-YNRLYDRFP 206
S E CHYLH+ K+ EAL YNR P
Sbjct: 825 SVEYCHYLHLAAEEALKIGANQEALDLYNRCIKMIP 860
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = +2
Query: 554 DHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKTYEIQKEFEK 691
DHT+ H F++++LK L + + A+ + ++++ + Q F +
Sbjct: 113 DHTDLHDFDVKNLKSLSLPS----HVAEDRTAQQYRQNKYQLHFSR 154
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.1 bits (57), Expect = 3.6
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +2
Query: 413 VNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDL 592
+N +R +RR L+++ L + +F TNDL+ P D +N ++ +E L
Sbjct: 1712 INTILRRNNSRGRRRMLQQMSPLKSNKFSGTNDLNFQQATKP-----DGSNKSSY-MERL 1765
Query: 593 KKLIMKTTSDLEAADKKR 646
+KL + L++ K+
Sbjct: 1766 EKLKQNSERHLQSVGGKK 1783
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 26.6 bits (56), Expect = 4.7
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Frame = +2
Query: 335 LISGKRLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLR-HLATKQFELTND 511
+++ K+ +E+ ++ + D + + +L EI+R E E R + T+Q+E +
Sbjct: 126 MVNRKQRAAKEEQKIQEEFERQITDLLEEQQQLKL-EIERLEAETERANSETEQYEKQKE 184
Query: 512 LHVNMGKVPSSEHLDHTNAHTFEI-------EDLKKLIMKTTSDLEAADKKRREEFKTYE 670
+ +E L H EI E++++ + K SD + ADK ++
Sbjct: 185 ALEEEYEELRNECLKHDPQLDAEIRTLQDTFEEVERTLTKQVSDAKIADKPLKDSMFNSN 244
Query: 671 IQKEFEKH--QKMEEMGD 718
+KE H +K E+ D
Sbjct: 245 SEKEKIMHALEKAEKDAD 262
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 26.2 bits (55), Expect = 6.3
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Frame = +2
Query: 485 TKQFELTNDLHVNMGK-----VPSSEHLDHTNAHT---FEIEDLKKLIMKT 613
T+ F +D +N GK +P HT++ T F IEDLK+L+ +T
Sbjct: 188 TEVFCEVHDAELNDGKDCVHAIPHGLTYSHTDSSTYKVFPIEDLKRLVYET 238
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 545 EHLDHTNAHTFEI--EDLKKLIMKTTSDLEAADKKRREEFKTYEI 673
E LD+ ++H I +DLK + + + ++K F+TYE+
Sbjct: 464 EMLDYYSSHNVTISEDDLKNFSLVLCTHVAKVNEKTNSIFRTYEV 508
>SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein
Usp106|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 25.8 bits (54), Expect = 8.3
Identities = 20/93 (21%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Frame = +2
Query: 338 ISGKRLEKADEEDVKSGKIAEQLDFVNHNVR---TRLDEIKRREL--ERLRH------LA 484
I+ R EK EE+ + ++ + +H++ T ++ + +R+L + ++H L
Sbjct: 101 IAEARREKTKEEEERIDELMRDIIHTDHSIEVIITEMEALAKRKLVNDAVKHFIELNRLK 160
Query: 485 TKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEI 583
T + EL +++ ++M ++PS H +I
Sbjct: 161 TYRKELYDEV-ISMNEIPSQASTTHQKLQVCDI 192
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,170,756
Number of Sequences: 5004
Number of extensions: 59375
Number of successful extensions: 231
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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