Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_O09
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical pr... 118 7e-27
Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical pr... 118 7e-27
AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin ... 118 7e-27
Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z68159-6|CAA92287.5| 485|Caenorhabditis elegans Hypothetical pr... 33 0.36
U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z69787-10|CAH65466.1| 398|Caenorhabditis elegans Hypothetical p... 32 0.63
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 32 0.63
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical... 31 1.5
AC024766-1|AAF59490.2| 160|Caenorhabditis elegans Hypothetical ... 30 1.9
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical p... 29 4.5
Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical pr... 29 4.5
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 29 4.5
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 29 4.5
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 29 4.5
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 29 4.5
AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical... 29 4.5
U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical pr... 29 5.9
U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical pr... 29 5.9
AL032631-10|CAB63339.1| 291|Caenorhabditis elegans Hypothetical... 29 5.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z75550-6|CAA99930.1| 591|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z73911-8|CAL64005.1| 367|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z73911-7|CAA98142.2| 483|Caenorhabditis elegans Hypothetical pr... 28 7.8
U32305-2|AAZ82852.1| 204|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical
protein F44A6.1b protein.
Length = 467
Score = 118 bits (283), Expect = 7e-27
Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 3/184 (1%)
Frame = +2
Query: 347 KRLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNM 526
+RL+ EED+K+G IA+ +D + V +L + K E+ERLR +Q + H N+
Sbjct: 90 ERLKNMKEEDIKAGNIADHIDDLPQEVFDKLHKAKFDEIERLRKQIEEQIKADGGAH-NI 148
Query: 527 GKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKTYEIQKEFEKHQKME 706
K+P +HLD F EDL+KLI KT +D+ D++R+++FK YE++K+ E+ K+
Sbjct: 149 -KMP--DHLDVQELEKFHKEDLRKLIQKTVADMNVMDEQRKDDFKQYEMKKQAEEDHKLA 205
Query: 707 EM--GDNXXXXXXXXXXXXXXXXXXXXXXPGSKQQLXXVWEKQDHMDQ-QFDPKVSFMMH 877
+M + PGSK QL VWE+ DH+++ Q+DPK F +H
Sbjct: 206 QMTPEEREKAKSEHEESLKRHNDHEKLKHPGSKDQLQEVWEESDHLEKDQYDPKTFFALH 265
Query: 878 DVDG 889
D++G
Sbjct: 266 DLNG 269
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 289 YHRYLKEVVQALESDPDFREAIR 357
Y +YL+EVV+ LESDP F E ++
Sbjct: 71 YTKYLEEVVKILESDPKFNERLK 93
>Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical
protein F44A6.1a protein.
Length = 453
Score = 118 bits (283), Expect = 7e-27
Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 3/184 (1%)
Frame = +2
Query: 347 KRLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNM 526
+RL+ EED+K+G IA+ +D + V +L + K E+ERLR +Q + H N+
Sbjct: 90 ERLKNMKEEDIKAGNIADHIDDLPQEVFDKLHKAKFDEIERLRKQIEEQIKADGGAH-NI 148
Query: 527 GKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKTYEIQKEFEKHQKME 706
K+P +HLD F EDL+KLI KT +D+ D++R+++FK YE++K+ E+ K+
Sbjct: 149 -KMP--DHLDVQELEKFHKEDLRKLIQKTVADMNVMDEQRKDDFKQYEMKKQAEEDHKLA 205
Query: 707 EM--GDNXXXXXXXXXXXXXXXXXXXXXXPGSKQQLXXVWEKQDHMDQ-QFDPKVSFMMH 877
+M + PGSK QL VWE+ DH+++ Q+DPK F +H
Sbjct: 206 QMTPEEREKAKSEHEESLKRHNDHEKLKHPGSKDQLQEVWEESDHLEKDQYDPKTFFALH 265
Query: 878 DVDG 889
D++G
Sbjct: 266 DLNG 269
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 289 YHRYLKEVVQALESDPDFREAIR 357
Y +YL+EVV+ LESDP F E ++
Sbjct: 71 YTKYLEEVVKILESDPKFNERLK 93
>AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin
protein.
Length = 456
Score = 118 bits (283), Expect = 7e-27
Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 3/184 (1%)
Frame = +2
Query: 347 KRLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNM 526
+RL+ EED+K+G IA+ +D + V +L + K E+ERLR +Q + H N+
Sbjct: 93 ERLKNMKEEDIKAGNIADHIDDLPQEVFDKLHKAKFDEIERLRKQIEEQIKADGGAH-NI 151
Query: 527 GKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKTYEIQKEFEKHQKME 706
K+P +HLD F EDL+KLI KT +D+ D++R+++FK YE++K+ E+ K+
Sbjct: 152 -KMP--DHLDVQELEKFHKEDLRKLIQKTVADMNVMDEQRKDDFKQYEMKKQAEEDHKLA 208
Query: 707 EM--GDNXXXXXXXXXXXXXXXXXXXXXXPGSKQQLXXVWEKQDHMDQ-QFDPKVSFMMH 877
+M + PGSK QL VWE+ DH+++ Q+DPK F +H
Sbjct: 209 QMTPEEREKAKSEHEESLKRHNDHEKLKHPGSKDQLQEVWEESDHLEKDQYDPKTFFALH 268
Query: 878 DVDG 889
D++G
Sbjct: 269 DLNG 272
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 289 YHRYLKEVVQALESDPDFREAIR 357
Y +YL+EVV+ LESDP F E ++
Sbjct: 74 YTKYLEEVVKILESDPKFNERLK 96
>Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical
protein B0284.1 protein.
Length = 431
Score = 35.1 bits (77), Expect = 0.068
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Frame = +2
Query: 350 RLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRH-LATKQFELTNDLHVNM 526
++ + + +D KI EQ + R D+I+ + E L+ +A+ L N VN
Sbjct: 57 QIAEQNRKDEMMKKILEQSQKTRAEDQARADQIRTQNEENLKEAVASGNQLLDNQRIVNQ 116
Query: 527 GKVPSSEHLDHTNAHTFE---IEDLKKLIMKTTSDLEAADKKRREEFKTYEIQKEFE--K 691
+V + DH N T E + + +K I + D++ +KK + K + +KE++ K
Sbjct: 117 AEV-TKRLTDHQNLMTREQGRLAETEKKIEENVVDMK--NKKAEAQEKLHSEKKEYDEKK 173
Query: 692 HQKMEE 709
QK EE
Sbjct: 174 LQKSEE 179
>Z68159-6|CAA92287.5| 485|Caenorhabditis elegans Hypothetical
protein C33D9.6 protein.
Length = 485
Score = 32.7 bits (71), Expect = 0.36
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = +2
Query: 380 KSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDH 559
K KI E ++ +N + + R ELERLR ATK T+D + K+ ++H
Sbjct: 218 KDQKILELEKYIRNNENQDVVALTR-ELERLRSQATKDEPSTDDSTI---KISMAQHRLE 273
Query: 560 TNAHTFEIEDLKKLIMK----TTSDLEAADKKRREEFKTYEIQKEFEKHQK 700
A I+ L+ + K +E ++R E K ++ E H+K
Sbjct: 274 LEAQAKMIKTLEAELSKRQEINAEQIERLIEERNSEIKNLIREQSKEIHEK 324
>U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical
protein F42C5.3 protein.
Length = 250
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 569 HTFEIEDLKKLIMKTTSDLEAADKKRREEFKTYEIQ-KEFEKHQKMEE 709
H+ E++ L+ K S+ E D+KRRE + ++ + E EK K EE
Sbjct: 5 HSKEMDRLRSQAAKVQSEKETFDRKRRETLEKHKKELDELEKKNKKEE 52
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 31.9 bits (69), Expect = 0.63
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 434 RLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKT 613
R D K R+L R ATK E+ + L + G+ S +D A + + LKK ++
Sbjct: 87 REDHEKARQLSRPSSQATKSSEVASRLSSDQGRESSIGLMDQMVASSDAFDSLKKDRKRS 146
Query: 614 TSD-LEAADKKRREEFKTYEIQKEFEKHQK 700
D L+ + K + ++ +I+ E ++ +K
Sbjct: 147 PVDALQTSAPKTMKPKRSEDIKDEKQRDEK 176
>Z69787-10|CAH65466.1| 398|Caenorhabditis elegans Hypothetical
protein C44C10.11 protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.63
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +2
Query: 413 VNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDL 592
V H + L E+K++ +E L+ T+ +L ND+ +N +DH + T E +L
Sbjct: 273 VEHAAKMML-ELKQKHIEELQMKTTQITKLENDVKLN------GNFMDHISELTEENHNL 325
Query: 593 K-KLIMKTTSDLE-AADKKRREEFKTYEIQKEFEKHQKMEEMGDN 721
K +L KT ++ + A+ K++ + + + K + E DN
Sbjct: 326 KEQLKQKTDAETKMIAEMKKKHRGERHYMNSRITKLEDALEYKDN 370
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 31.9 bits (69), Expect = 0.63
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 434 RLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKT 613
R D K R+L R ATK E+ + L + G+ S +D A + + LKK ++
Sbjct: 87 REDHEKARQLSRPSSQATKSSEVASRLSSDQGRESSIGLMDQMVASSDAFDSLKKDRKRS 146
Query: 614 TSD-LEAADKKRREEFKTYEIQKEFEKHQK 700
D L+ + K + ++ +I+ E ++ +K
Sbjct: 147 PVDALQTSAPKTMKPKRSEDIKDEKQRDEK 176
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 31.5 bits (68), Expect = 0.84
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 533 VPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADK--KRREEFKTYEIQKEFEKHQKME 706
VP E + N H ++ED KK +S + AD+ + ++ K ++ K+ +KH + E
Sbjct: 725 VPVEEDEEPEN-HDEDVEDHKKEKESQSSTINTADEDDESSKKMKKHKKSKKNKKHHRKE 783
Query: 707 EMGD 718
E GD
Sbjct: 784 EDGD 787
>Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical
protein T26E4.8 protein.
Length = 315
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = -2
Query: 132 LHVSNDSFRLILIVLFLNRCCFV 64
LH++N+ F L+L++LF N CF+
Sbjct: 195 LHITNEEFLLLLVLLFSNPGCFL 217
>Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 9/124 (7%)
Frame = +2
Query: 353 LEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRE--LERLRHLATKQFEL--TNDLHV 520
L ++ D K + AE +D++ H +R+ +E+ R E LE L + T + + D
Sbjct: 108 LSAEEKLDPKEKEKAETMDWIQHQIRSLNEEVDRTEMQLESLSNTDTGKGKRGKKEDAKT 167
Query: 521 NMGKVPSSE----HLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKTY-EIQKEF 685
+ E HL+ N H ++E ++I + + + + +E +TY E+ E
Sbjct: 168 KNEREKRVEGLKHHLERINFHIEKLEICMRMISNESLNAKMVLETLKEPIETYVEMMNEE 227
Query: 686 EKHQ 697
+ +
Sbjct: 228 DSEE 231
>AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 9/124 (7%)
Frame = +2
Query: 353 LEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRE--LERLRHLATKQFEL--TNDLHV 520
L ++ D K + AE +D++ H +R+ +E+ R E LE L + T + + D
Sbjct: 108 LSAEEKLDPKEKEKAETMDWIQHQIRSLNEEVDRTEMQLESLSNTDTGKGKRGKKEDAKT 167
Query: 521 NMGKVPSSE----HLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKTY-EIQKEF 685
+ E HL+ N H ++E ++I + + + + +E +TY E+ E
Sbjct: 168 KNEREKRVEGLKHHLERINFHIEKLEICMRMISNESLNAKMVLETLKEPIETYVEMMNEE 227
Query: 686 EKHQ 697
+ +
Sbjct: 228 DSEE 231
>AC024766-1|AAF59490.2| 160|Caenorhabditis elegans Hypothetical
protein Y39G10AL.1 protein.
Length = 160
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 584 EDLKKLIMKTTSDLEAADKKRREEFKTYEIQKEFEK 691
E LK +M +DL A ++K+R+E++ + ++ F+K
Sbjct: 99 EQLKSELMDIVNDLMAREQKKRQEYQEEQDEQAFDK 134
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 527 GKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKTYEIQKEFEKHQKME 706
G +P E D + F IE + TTS + +KRR+ +T E + K +KM
Sbjct: 497 GSIPPHEKSD--DPQEFSIEKSSESDTITTSSRASTLRKRRDPNRTLENLQSILKAEKMN 554
Query: 707 EMGD 718
GD
Sbjct: 555 NGGD 558
>Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +2
Query: 368 EEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVN 523
E+D+KS K+AE+LDF + + E+ER TK F NDLH++
Sbjct: 477 EQDLKSLKLAEKLDF-------EIVDGMESEIERCYEAHTKSF---NDLHMH 518
>Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +2
Query: 368 EEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVN 523
E+D+KS K+AE+LDF + + E+ER TK F NDLH++
Sbjct: 477 EQDLKSLKLAEKLDF-------EIVDGMESEIERCYEAHTKSF---NDLHMH 518
>Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical
protein F28D1.2 protein.
Length = 268
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Frame = +2
Query: 572 TFEIEDLKKLI---MKTTSDL--EAADKKRREEFKTYEIQKEFEKHQKMEEMGD 718
T ++E KK+I K DL E ++ EE + YE++++FE ++ +E G+
Sbjct: 210 TGQLEAQKKIIADLQKKNDDLMKEEEGEEDYEEEENYEVEEDFEDEEEYDEEGE 263
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +2
Query: 428 RTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIM 607
R RL++ + RE+ R R ++ EL D+H + E L E E L+++ +
Sbjct: 492 RQRLED-EAREMRR-REEERREAELVADVH---RQAEERERLRKRQERE-EAERLERIRL 545
Query: 608 KTTS-DLEAADKKRREEFKTYEIQKEFE 688
+ D+E D +RRE + E ++EFE
Sbjct: 546 EQQKIDMERIDAERRERERKEEERREFE 573
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +2
Query: 428 RTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIM 607
R RL++ + RE+ R R ++ EL D+H + E L E E L+++ +
Sbjct: 492 RQRLED-EAREMRR-REEERREAELVADVH---RQAEERERLRKRQERE-EAERLERIRL 545
Query: 608 KTTS-DLEAADKKRREEFKTYEIQKEFE 688
+ D+E D +RRE + E ++EFE
Sbjct: 546 EQQKIDMERIDAERRERERKEEERREFE 573
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +2
Query: 428 RTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIM 607
R RL++ + RE+ R R ++ EL D+H + E L E E L+++ +
Sbjct: 492 RQRLED-EAREMRR-REEERREAELVADVH---RQAEERERLRKRQERE-EAERLERIRL 545
Query: 608 KTTS-DLEAADKKRREEFKTYEIQKEFE 688
+ D+E D +RRE + E ++EFE
Sbjct: 546 EQQKIDMERIDAERRERERKEEERREFE 573
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +2
Query: 428 RTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIM 607
R RL++ + RE+ R R ++ EL D+H + E L E E L+++ +
Sbjct: 492 RQRLED-EAREMRR-REEERREAELVADVH---RQAEERERLRKRQERE-EAERLERIRL 545
Query: 608 KTTS-DLEAADKKRREEFKTYEIQKEFE 688
+ D+E D +RRE + E ++EFE
Sbjct: 546 EQQKIDMERIDAERRERERKEEERREFE 573
>AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical
protein Y53F4B.24 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.5
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Frame = -2
Query: 417 LTKSSCSAIFPDLTSSSSAFSNRFPEIRITLQCLHNL--LEVPMILHILLQIILNFTVF* 244
L K+ CS IF D + +S NRF + + NL E+ +ILL+ +L+ +
Sbjct: 571 LLKADCSRIFLDGSELTSIELNRFLRSWLLSESNRNLKSFEIRTNENILLEQVLDLPIEA 630
Query: 243 FIRGH---RRSIRAVKE---------NDHTTYCN*EPHIDELILQGRLNLHVSNDSFRL 103
RR++ + E ND T Y + DE ++ R + +ND+ L
Sbjct: 631 TDENELEERRTLSTIYESGQFDQTLYNDLTLYTAKDEETDETLVSNRSDFEYTNDAISL 689
>U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical
protein C02H7.1 protein.
Length = 535
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/91 (21%), Positives = 45/91 (49%)
Frame = +2
Query: 437 LDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTT 616
LD+ + ++ + ++ K E TN + +G +S + + + + +KK K
Sbjct: 76 LDDGSLKNVKAAKIISGKDAEETNKMLQMLGTNATSFNSRNGTGEEKKKKKVKKEDKKGD 135
Query: 617 SDLEAADKKRREEFKTYEIQKEFEKHQKMEE 709
+ ++ KKR + +T+E +++ EK + EE
Sbjct: 136 EEEKSTTKKRSSKKETHEEKEKSEKKKSAEE 166
>U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical
protein W05H9.1 protein.
Length = 414
Score = 28.7 bits (61), Expect = 5.9
Identities = 27/112 (24%), Positives = 51/112 (45%)
Frame = +2
Query: 347 KRLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNM 526
+++EK + K + E+L + +LDE ++++LE L+ + EL V
Sbjct: 158 EQIEKWKQASEKLQQQREELKQQIDAAKQKLDERRKQKLEELKTDLAQVKELVT-AEVKR 216
Query: 527 GKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKTYEIQKE 682
++ L + E LK+ I +D+E K ++ KTYE +K+
Sbjct: 217 RVDEKNQRLGEQRENH---EALKQQINDKLADIEQQGKNVGDQAKTYEQKKD 265
>AL032631-10|CAB63339.1| 291|Caenorhabditis elegans Hypothetical
protein Y106G6H.9 protein.
Length = 291
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 14 LAIIGNPLRFEYIITWATKQHLFKNNTINIKRKLSLLTCR 133
L I N E+ TW T HLF + + I + S LT +
Sbjct: 160 LIITSNSFLVEHAATWVTLNHLFNFDCLEIGLRRSNLTAK 199
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 512 LHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKTYEIQKEFEK 691
L +N +V D + E+ K+ + K D + ++ ++EE K E QKE +
Sbjct: 273 LRINHKEVAEKNEEDKKEEEPKKEEEKKEEVEKKEEDEKKDEEPKKEEEKKEEEQKEEVE 332
Query: 692 HQKMEEMGD 718
++ EE D
Sbjct: 333 KKEEEEKKD 341
>Z75550-6|CAA99930.1| 591|Caenorhabditis elegans Hypothetical
protein T22C1.8 protein.
Length = 591
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 356 EKADEEDVKSGKIAEQLDFVNHN 424
EK DE+D K G + ++L F+ HN
Sbjct: 28 EKVDEKDKKKGGVLKRLGFLLHN 50
>Z73911-8|CAL64005.1| 367|Caenorhabditis elegans Hypothetical
protein T12A7.2b protein.
Length = 367
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 59 WATKQHLFKNNTINIKRKLSLLTCRFSRPCKINSSI*G 172
W + +F+ N+ + + L C F RPC I I G
Sbjct: 127 WVGEHCIFRCNSGVVNKTSGLCECLFGRPCTIQKCING 164
>Z73911-7|CAA98142.2| 483|Caenorhabditis elegans Hypothetical
protein T12A7.2a protein.
Length = 483
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 59 WATKQHLFKNNTINIKRKLSLLTCRFSRPCKINSSI*G 172
W + +F+ N+ + + L C F RPC I I G
Sbjct: 127 WVGEHCIFRCNSGVVNKTSGLCECLFGRPCTIQKCING 164
>U32305-2|AAZ82852.1| 204|Caenorhabditis elegans Hypothetical
protein B0336.5b protein.
Length = 204
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 461 LERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADK 640
L ++ LA EL ND + SE D +A F+ + KKL + +S E++
Sbjct: 7 LAQIAGLAKAAAELENDFSTDSEMQQDSEICDEVDAELFDDFETKKL--QPSSRKESSGT 64
Query: 641 KRREEFKTYEIQ 676
RR E+Q
Sbjct: 65 SRRTRMAHRELQ 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,490,169
Number of Sequences: 27780
Number of extensions: 328811
Number of successful extensions: 1425
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1413
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -