Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_O08
(925 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016452-4|AAB66015.1| 539|Caenorhabditis elegans Hypothetical ... 34 0.12
U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 32 0.67
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 32 0.67
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 32 0.67
AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical ... 31 0.88
AF047657-9|AAK18945.1| 329|Caenorhabditis elegans Seven tm rece... 31 0.88
Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 31 1.5
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 31 1.5
U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t prot... 29 3.6
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 29 3.6
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 29 3.6
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 29 3.6
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 29 3.6
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 29 3.6
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z11505-5|CAA77589.1| 435|Caenorhabditis elegans Hypothetical pr... 29 4.7
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 29 4.7
Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical pr... 29 6.2
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 29 6.2
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 29 6.2
AC006807-3|AAK84617.1| 883|Caenorhabditis elegans Hypothetical ... 29 6.2
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical pr... 28 8.2
U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like pr... 28 8.2
AF130407-1|AAD42308.1| 632|Caenorhabditis elegans phophoinositi... 28 8.2
AF130406-1|AAD42307.1| 636|Caenorhabditis elegans phophoinositi... 28 8.2
AF026207-4|AAK82904.1| 632|Caenorhabditis elegans Pdk-class pro... 28 8.2
AF026207-3|AAK82905.1| 636|Caenorhabditis elegans Pdk-class pro... 28 8.2
>AF016452-4|AAB66015.1| 539|Caenorhabditis elegans Hypothetical
protein T05H4.9 protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.12
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Frame = +2
Query: 293 ETPNDELFDFRGARAQRGRPLSSALEDDEFNEDITESLKRLRASKKTSRFADDIDFENSV 472
E ++ + FRG + + R LSS +E ++ + + L +LR +K + DF S
Sbjct: 94 ELLDEAIVFFRGTK-KGSRTLSSMMEKYKWIKRECD-LSKLRKYEK-----ERDDFTESR 146
Query: 473 TNLENRMR------ISDKILESVGIGHSEVSSARRALQDNEERTEKRIARRLEDNSLTKW 634
TNL R+ + DK+ + + I S+++S R + +NE + E IA N ++KW
Sbjct: 147 TNLLRRLGKTLYEVVKDKLEKGMMIHDSDLASIAREINNNETKVENFIA---SSNWVSKW 203
Query: 635 TVKRR 649
R
Sbjct: 204 KKSHR 208
>U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical
protein R09H3.1 protein.
Length = 1073
Score = 32.7 bits (71), Expect = 0.38
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +2
Query: 227 EPERESIRADVDNRIKSALHDMETPNDELFDFRGARAQRGRP-LSSALEDDEFNEDITES 403
E E+E R DVD + + D+E EL + + + +EDD+ + +S
Sbjct: 80 EAEKEIERLDVDQTLMNIKKDVEMFKTELASHNYIISPPDEDVVLTEIEDDDLEVNRDQS 139
Query: 404 LKRLRASKKTSRFADDIDFENSVTNLENRMRIS-DKILESVGIGHSEVSSARRALQDNEE 580
L R ++ ++ F+ I N + NLEN +R +K+ + + + A +A + NE+
Sbjct: 140 L-RNSSNYHSATFS--IYNTNEIPNLENDLRAEVEKLKAELALKDENLKKAEQASKANEK 196
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 31.9 bits (69), Expect = 0.67
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +2
Query: 332 RAQRGRPLSSALEDDEFNEDITESLKRLRASKKTSRFADDIDFENSVTNLENRMR----I 499
R +R R E + + E KRL ++ + +I+ EN E R R +
Sbjct: 1198 RLERLRKAEREREQERLKREEEEERKRLEQLREAEKLKAEIEKENERKLQEERTRKALEL 1257
Query: 500 SDKILESVGIGHSEVSSARRALQDNEERTEKRIARRLEDNSLTKWTVKR 646
KI E + + + E+TEK L+D+ LT T+ R
Sbjct: 1258 ERKIEEIKRVSTLKDMFGPLPIAKENEQTEKDFQILLDDHELTLLTISR 1306
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 31.9 bits (69), Expect = 0.67
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +2
Query: 332 RAQRGRPLSSALEDDEFNEDITESLKRLRASKKTSRFADDIDFENSVTNLENRMR----I 499
R +R R E + + E KRL ++ + +I+ EN E R R +
Sbjct: 1198 RLERLRKAEREREQERLKREEEEERKRLEQLREAEKLKAEIEKENERKLQEERTRKALEL 1257
Query: 500 SDKILESVGIGHSEVSSARRALQDNEERTEKRIARRLEDNSLTKWTVKR 646
KI E + + + E+TEK L+D+ LT T+ R
Sbjct: 1258 ERKIEEIKRVSTLKDMFGPLPIAKENEQTEKDFQILLDDHELTLLTISR 1306
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 31.9 bits (69), Expect = 0.67
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +2
Query: 332 RAQRGRPLSSALEDDEFNEDITESLKRLRASKKTSRFADDIDFENSVTNLENRMR----I 499
R +R R E + + E KRL ++ + +I+ EN E R R +
Sbjct: 1198 RLERLRKAEREREQERLKREEEEERKRLEQLREAEKLKAEIEKENERKLQEERTRKALEL 1257
Query: 500 SDKILESVGIGHSEVSSARRALQDNEERTEKRIARRLEDNSLTKWTVKR 646
KI E + + + E+TEK L+D+ LT T+ R
Sbjct: 1258 ERKIEEIKRVSTLKDMFGPLPIAKENEQTEKDFQILLDDHELTLLTISR 1306
>AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical
protein F19B2.6 protein.
Length = 807
Score = 31.5 bits (68), Expect = 0.88
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +2
Query: 371 DDEFNEDITESLKRLRASKKTSRFADDIDFENSVTNLENRMRISDKILESVGIGHSEVSS 550
DD ++ E + KKT R + ++ S+ ++ ++ S K E V I H+ + S
Sbjct: 533 DDSMSQTSQEPVSVESIRKKTKRAKNKLEARKSLQKKKDDLKASRKSWEEVKINHNNILS 592
Query: 551 ARRALQDN 574
+ + ++N
Sbjct: 593 SNNSNEEN 600
>AF047657-9|AAK18945.1| 329|Caenorhabditis elegans Seven tm
receptor protein 39 protein.
Length = 329
Score = 31.5 bits (68), Expect = 0.88
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = -1
Query: 652 LSSFNSPFRKRIIFESPGDALFCAFFVILQSTSGAADFRVTNPDAF-EYFVRNPHSVFEI 476
+S FN K +FE+ G + + V + S +GAA + +T PD F + ++RN +FE
Sbjct: 115 VSLFNPDLTK--LFENYGAIAWSMYPVFIGSVNGAAIWCLTRPDEFSDDYMRN--EIFE- 169
Query: 475 GDAVLKVDVVSEPRSL 428
V ++D+ + PR L
Sbjct: 170 ---VYELDISTLPRLL 182
>Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 30.7 bits (66), Expect = 1.5
Identities = 31/129 (24%), Positives = 54/129 (41%)
Frame = +2
Query: 50 VPFCFPDAYTRSRXTRKQSKMSRVGRTRRTRVYDCNYNKGESYYRPVLDRLDGKAPIVRE 229
VPF PDAYT +R TR+ + S ++R + Y++ + V L G+ +
Sbjct: 215 VPFLRPDAYTEARITRRLALTSTATLSQRRERFLKKYSQ---IRQVVAQNLFGQQQRLTR 271
Query: 230 PERESIRADVDNRIKSALHDMETPNDELFDFRGARAQRGRPLSSALEDDEFNEDITESLK 409
P E + + +++ ET E + + + A E E E+ TE+ +
Sbjct: 272 PV-EDLVTETSSKLAVEEAPEETTTQEETTTDASEVTTTKAVEEATE--EVTEEATEATE 328
Query: 410 RLRASKKTS 436
A+ K S
Sbjct: 329 APVATTKES 337
>Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 30.7 bits (66), Expect = 1.5
Identities = 31/129 (24%), Positives = 54/129 (41%)
Frame = +2
Query: 50 VPFCFPDAYTRSRXTRKQSKMSRVGRTRRTRVYDCNYNKGESYYRPVLDRLDGKAPIVRE 229
VPF PDAYT +R TR+ + S ++R + Y++ + V L G+ +
Sbjct: 215 VPFLRPDAYTEARITRRLALTSTATLSQRRERFLKKYSQ---IRQVVAQNLFGQQQRLTR 271
Query: 230 PERESIRADVDNRIKSALHDMETPNDELFDFRGARAQRGRPLSSALEDDEFNEDITESLK 409
P E + + +++ ET E + + + A E E E+ TE+ +
Sbjct: 272 PV-EDLVTETSSKLAVEEAPEETTTQEETTTDASEVTTTKAVEEATE--EVTEEATEATE 328
Query: 410 RLRASKKTS 436
A+ K S
Sbjct: 329 APVATTKES 337
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +2
Query: 350 PLSSALEDDEFNEDITES-LKRL-RASKKTSRFADDIDFENSVTNLENRMRISDKILESV 523
P+ L DD+ + D TES LKR SK SR D S + R R +++ S
Sbjct: 1483 PVIDLLNDDDMDSDKTESPLKRKDPRSKNRSRSRDRARRSRSREHKRARSRSAERRRRSR 1542
Query: 524 GIGHSEVSSARRALQDNEERTEKRIARR 607
S R+ +D RT+ R R
Sbjct: 1543 TRSRSRSRERYRSRRDRRSRTKSRSRSR 1570
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +2
Query: 350 PLSSALEDDEFNEDITES-LKRL-RASKKTSRFADDIDFENSVTNLENRMRISDKILESV 523
P+ L DD+ + D TES LKR SK SR D S + R R +++ S
Sbjct: 108 PVIDLLNDDDMDSDKTESPLKRKDPRSKNRSRSRDRARRSRSREHKRARSRSAERRRRSR 167
Query: 524 GIGHSEVSSARRALQDNEERTEKRIARR 607
S R+ +D RT+ R R
Sbjct: 168 TRSRSRSRERYRSRRDRRSRTKSRSRSR 195
>U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t protein
3, isoform c protein.
Length = 279
Score = 29.5 bits (63), Expect = 3.6
Identities = 26/94 (27%), Positives = 39/94 (41%)
Frame = +2
Query: 371 DDEFNEDITESLKRLRASKKTSRFADDIDFENSVTNLENRMRISDKILESVGIGHSEVSS 550
D+E E E ++ A +T D S T E + ++ + + H E
Sbjct: 10 DEEVEEVDEEEVEADYAPSETDTTRSDRPKTKSFTEDEEGLTEGERAMAAAKRRHEEEQH 69
Query: 551 ARRALQDNEERTEKRIARRLEDNSLTKWTVKRRK 652
A+ LQD EER +R R E+ L K K+ K
Sbjct: 70 AK--LQDYEER--RRTEREKEEEELKKLKEKQEK 99
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 29.5 bits (63), Expect = 3.6
Identities = 26/94 (27%), Positives = 39/94 (41%)
Frame = +2
Query: 371 DDEFNEDITESLKRLRASKKTSRFADDIDFENSVTNLENRMRISDKILESVGIGHSEVSS 550
D+E E E ++ A +T D S T E + ++ + + H E
Sbjct: 844 DEEVEEVDEEEVEADYAPSETDTTRSDRPKTKSFTEDEEGLTEGERAMAAAKRRHEEEQH 903
Query: 551 ARRALQDNEERTEKRIARRLEDNSLTKWTVKRRK 652
A+ LQD EER +R R E+ L K K+ K
Sbjct: 904 AK--LQDYEER--RRTEREKEEEELKKLKEKQEK 933
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 29.5 bits (63), Expect = 3.6
Identities = 26/94 (27%), Positives = 39/94 (41%)
Frame = +2
Query: 371 DDEFNEDITESLKRLRASKKTSRFADDIDFENSVTNLENRMRISDKILESVGIGHSEVSS 550
D+E E E ++ A +T D S T E + ++ + + H E
Sbjct: 10 DEEVEEVDEEEVEADYAPSETDTTRSDRPKTKSFTEDEEGLTEGERAMAAAKRRHEEEQH 69
Query: 551 ARRALQDNEERTEKRIARRLEDNSLTKWTVKRRK 652
A+ LQD EER +R R E+ L K K+ K
Sbjct: 70 AK--LQDYEER--RRTEREKEEEELKKLKEKQEK 99
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 386 EDITESLKRLRASKKTSRFADDIDFENSVTNLENRMRISDKILESVGIGHSEVSSARRAL 565
ED+ K L A + RF +D+D + ++ +M + G + + +++
Sbjct: 632 EDVESKTKILEAVSRKMRFEEDVDLREIASKVDEKMSGAQLFSIISNAGMAAIVETIQSI 691
Query: 566 QDNE-ERTEKRIARR 607
+D + E R+A+R
Sbjct: 692 EDGKTENQSIRVAQR 706
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 386 EDITESLKRLRASKKTSRFADDIDFENSVTNLENRMRISDKILESVGIGHSEVSSARRAL 565
ED+ K L A + RF +D+D + ++ +M + G + + +++
Sbjct: 632 EDVESKTKILEAVSRKMRFEEDVDLREIASKVDEKMSGAQLFSIISNAGMAAIVETIQSI 691
Query: 566 QDNE-ERTEKRIARR 607
+D + E R+A+R
Sbjct: 692 EDGKTENQSIRVAQR 706
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 386 EDITESLKRLRASKKTSRFADDIDFENSVTNLENRMRISDKILESVGIGHSEVSSARRAL 565
ED+ K L A + RF +D+D + ++ +M + G + + +++
Sbjct: 632 EDVESKTKILEAVSRKMRFEEDVDLREIASKVDEKMSGAQLFSIISNAGMAAIVETIQSI 691
Query: 566 QDNE-ERTEKRIARR 607
+D + E R+A+R
Sbjct: 692 EDGKTENQSIRVAQR 706
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +2
Query: 407 KRLRASKKTSRFADDIDFENSVTNLENRMRISDKILESVGIGHSEVSSARRALQDNEERT 586
K L AS+ + + + + + + + K++ESV IG VSS ++ +E+ T
Sbjct: 506 KALGASRGSGGGNAEFNSQKLIEMAKQEVEKQRKLMESVNIGGENVSSEYSSMAQDEDGT 565
Query: 587 EKRIARRLEDNSL 625
L++ L
Sbjct: 566 SNEAEELLDEEDL 578
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +2
Query: 407 KRLRASKKTSRFADDIDFENSVTNLENRMRISDKILESVGIGHSEVSSARRALQDNEERT 586
K L AS+ + + + + + + + K++ESV IG VSS ++ +E+ T
Sbjct: 506 KALGASRGSGGGNAEFNSQKLIEMAKQEVEKQRKLMESVNIGGENVSSEYSSMAQDEDGT 565
Query: 587 EKRIARRLEDNSL 625
L++ L
Sbjct: 566 SNEAEELLDEEDL 578
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +2
Query: 407 KRLRASKKTSRFADDIDFENSVTNLENRMRISDKILESVGIGHSEVSSARRALQDNEERT 586
K L AS+ + + + + + + + K++ESV IG VSS ++ +E+ T
Sbjct: 506 KALGASRGSGGGNAEFNSQKLIEMAKQEVEKQRKLMESVNIGGENVSSEYSSMAQDEDGT 565
Query: 587 EKRIARRLEDNSL 625
L++ L
Sbjct: 566 SNEAEELLDEEDL 578
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +2
Query: 407 KRLRASKKTSRFADDIDFENSVTNLENRMRISDKILESVGIGHSEVSSARRALQDNEERT 586
K L AS+ + + + + + + + K++ESV IG VSS ++ +E+ T
Sbjct: 506 KALGASRGSGGGNAEFNSQKLIEMAKQEVEKQRKLMESVNIGGENVSSEYSSMAQDEDGT 565
Query: 587 EKRIARRLEDNSL 625
L++ L
Sbjct: 566 SNEAEELLDEEDL 578
>Z11505-5|CAA77589.1| 435|Caenorhabditis elegans Hypothetical
protein F59B2.8 protein.
Length = 435
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 62 FPDAYTRSRXTRKQSKMSRVGRTRRTRVYDCNYN 163
F + Y R + ++S +GR RR R++D YN
Sbjct: 395 FVETYRILRGMDSEVRLSSIGRVRRRRIFDEMYN 428
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +2
Query: 407 KRLRASKKTSRFADDIDFENSVTNLENRMRISDKILESVGIGHSEVSSARRALQDNEERT 586
K L AS+ + + + + + + + K++ESV IG VSS ++ +E+ T
Sbjct: 510 KALGASRGSGGGNAEFNSQKLIEMAKQEVEKQRKLMESVNIGGENVSSEYSSMAQDEDGT 569
Query: 587 EKRIARRLEDNSL 625
L++ L
Sbjct: 570 SNEAEELLDEEDL 582
>Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical
protein C06C3.3 protein.
Length = 576
Score = 28.7 bits (61), Expect = 6.2
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +2
Query: 395 TESLKRLRASKKTSRFADD-IDFENS--VTNLENRMRISDKI--LESVGIGHSEVSSARR 559
TES+ + S+K + DD + F S VT R SD+ + + + S R
Sbjct: 330 TESIVSSKISRKNAPKDDDEVRFHRSYQVTETTYTTRNSDETDRRKPENVEKTVESKNDR 389
Query: 560 ALQDNEERTEKRIARRLEDNSLTKWTVKRRK 652
++QD E+ EK++ +L T+ T + +
Sbjct: 390 SVQDKSEKIEKKVPEKLSKPQKTETTKSKER 420
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 497 ISDKILESVGIGHSEVSSARRALQDNEERTEKRIARRLED 616
ISDK E+V H +S R N++++ KR+AR + +
Sbjct: 281 ISDKCREAVQKDHEAFASTRLLSAANQKKSLKRVARDINE 320
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 497 ISDKILESVGIGHSEVSSARRALQDNEERTEKRIARRLED 616
ISDK E+V H +S R N++++ KR+AR + +
Sbjct: 452 ISDKCREAVQKDHEAFASTRLLSAANQKKSLKRVARDINE 491
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 497 ISDKILESVGIGHSEVSSARRALQDNEERTEKRIARRLED 616
ISDK E+V H +S R N++++ KR+AR + +
Sbjct: 191 ISDKCREAVQKDHEAFASTRLLSAANQKKSLKRVARDINE 230
>AC006807-3|AAK84617.1| 883|Caenorhabditis elegans Hypothetical
protein Y58A7A.3 protein.
Length = 883
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -2
Query: 354 RGLPRWARAPLKSNSSSLGVSMSCRALLMRLSTSARILSRSGSRTIGA 211
RG+PRW P S L S+ R + + +S+ LSR+ I A
Sbjct: 29 RGVPRWLGKPHNSVKERLHNSVKDRTFIQKTVSSSEPLSRNAMDRIEA 76
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +2
Query: 476 NLENRMRISDKILESVGIGHSEVSSARRALQDNEERTEKRIARRLEDNSLTKWTVKRRKP 655
+L+ +R+SD+I + V + + A+ E EK++ E + + +T+ R+ P
Sbjct: 23 SLQKLLRVSDEIFDRVEHRITRIHGKAEAIDRRTEVLEKKLESLQESDKVITFTLPRQLP 82
>Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical
protein ZK1098.1 protein.
Length = 724
Score = 28.3 bits (60), Expect = 8.2
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Frame = +2
Query: 350 PLSSALEDDEFNEDITESLKR--------LRASKKTSRFADDIDFENSVTNLEN--RMRI 499
PL S +++E D E KR LR + + +++ +V ++N R RI
Sbjct: 206 PLPSEKKEEESVNDEVELKKRQSERFRELLRDKYNDGKITTNCNWDQAVKWIQNDPRFRI 265
Query: 500 SDKILESVGIGHSEVSSARRALQDNEERTEKRIARRLEDNSLTKWTVKRRK 652
+K+ E ++ +A + + EER EKR+A + L K+ + K
Sbjct: 266 LNKVSEK-----KQLFNAWKVQRGKEERDEKRLAIKKSKEDLEKFLQEHPK 311
>U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like
protein protein 8 protein.
Length = 594
Score = 28.3 bits (60), Expect = 8.2
Identities = 26/137 (18%), Positives = 57/137 (41%), Gaps = 2/137 (1%)
Frame = +2
Query: 68 DAYTRSRXTRKQSKMSRVGRTRR-TRVYDCNYNKGESYYRPVLDRLDGKAPIVREPERES 244
+A+ + T + KM R R+ +R + + ES R + +P+ ++
Sbjct: 421 EAFRKMLVTLRHEKMERSQNPRKISRHNRSSAHDEESARRRSRTFSQDDTAVPNDPDSKN 480
Query: 245 IRADVDNRIKSALHDMETPNDELFDFR-GARAQRGRPLSSALEDDEFNEDITESLKRLRA 421
+ +N++ +D++ +L D R +S LE NE++TE ++ L
Sbjct: 481 VY--YENQLSKKDYDIQELRRQLMDVEIRLRENESVSMSRQLESVAHNEEMTEKVRVLEG 538
Query: 422 SKKTSRFADDIDFENSV 472
+ +ID+ ++
Sbjct: 539 KLQMLSSTSEIDYLRNI 555
>AF130407-1|AAD42308.1| 632|Caenorhabditis elegans
phophoinositide-dependent proteinkinase 1b protein.
Length = 632
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 514 EYFVRNPHSVFEIGDAVLKVDVVSEPRSLFARAQAF 407
E V+NP +F +LK + + R LFAR + F
Sbjct: 460 EQRVKNPFHIFTNNSLILKQGYLEKKRGLFARRRMF 495
>AF130406-1|AAD42307.1| 636|Caenorhabditis elegans
phophoinositide-dependent proteinkinase 1a protein.
Length = 636
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 514 EYFVRNPHSVFEIGDAVLKVDVVSEPRSLFARAQAF 407
E V+NP +F +LK + + R LFAR + F
Sbjct: 464 EQRVKNPFHIFTNNSLILKQGYLEKKRGLFARRRMF 499
>AF026207-4|AAK82904.1| 632|Caenorhabditis elegans Pdk-class
protein kinase protein1, isoform a protein.
Length = 632
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 514 EYFVRNPHSVFEIGDAVLKVDVVSEPRSLFARAQAF 407
E V+NP +F +LK + + R LFAR + F
Sbjct: 460 EQRVKNPFHIFTNNSLILKQGYLEKKRGLFARRRMF 495
>AF026207-3|AAK82905.1| 636|Caenorhabditis elegans Pdk-class
protein kinase protein1, isoform b protein.
Length = 636
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 514 EYFVRNPHSVFEIGDAVLKVDVVSEPRSLFARAQAF 407
E V+NP +F +LK + + R LFAR + F
Sbjct: 464 EQRVKNPFHIFTNNSLILKQGYLEKKRGLFARRRMF 499
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,730,967
Number of Sequences: 27780
Number of extensions: 266805
Number of successful extensions: 1016
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -