Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_N14
(922 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029512-1|AAH29512.1| 338|Homo sapiens phytanoyl-CoA 2-hydroxy... 76 2e-13
AL138764-5|CAI12911.2| 338|Homo sapiens phytanoyl-CoA 2-hydroxy... 76 2e-13
AF242386-1|AAF74123.1| 338|Homo sapiens phytanoyl-CoA hydroxyla... 76 2e-13
AF112977-1|AAD20602.1| 338|Homo sapiens phytanoil-CoA alpha hyd... 76 2e-13
AF023462-1|AAB81834.1| 338|Homo sapiens peroxisomal phytanoyl-C... 76 2e-13
AL138764-6|CAM15086.1| 321|Homo sapiens phytanoyl-CoA 2-hydroxy... 75 5e-13
AL138764-4|CAI12910.1| 296|Homo sapiens phytanoyl-CoA 2-hydroxy... 75 5e-13
CR542055-1|CAG46852.1| 338|Homo sapiens PHYH protein. 74 6e-13
BC125232-1|AAI25233.1| 1500|Homo sapiens ABCA6 protein protein. 33 1.9
BC125231-1|AAI25232.1| 1500|Homo sapiens ABCA6 protein protein. 33 1.9
AY028898-1|AAK30023.1| 1617|Homo sapiens ATP-binding cassette A6... 33 1.9
AK097296-1|BAC04994.1| 815|Homo sapiens protein ( Homo sapiens ... 33 1.9
AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6 p... 33 1.9
AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6 p... 33 1.9
BC053853-1|AAH53853.1| 291|Homo sapiens PHYHD1 protein protein. 32 3.4
AL672142-6|CAI10842.1| 291|Homo sapiens phytanoyl-CoA dioxygena... 32 3.4
>BC029512-1|AAH29512.1| 338|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 338
Score = 76.2 bits (179), Expect = 2e-13
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Frame = +1
Query: 193 LTEEQKKFYEENGYIVLKNVLSEEDLCSITIEYNNLFNRKNQEKMESSWVGSDHNDRKHD 372
LT EQ+KFYEENG++V+KN++ + D+ E+ + + + K V D K +
Sbjct: 53 LTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRK--EVKPLGLTVMRDVTISKSE 110
Query: 373 KNFTVKGIHNLQFHHAVFSKFIFNDNLLDALEDV--MNTKNIIFHHTKAHYKPPEKG--- 537
+ K I +Q F + L + L+ V NI+ HT KPP+ G
Sbjct: 111 YAPSEKMITKVQDFQEDKELFRYC-TLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKT 169
Query: 538 AAYPMHQDYHYFPYE-KDSMVASFLHLDAADPKNGCLYVYPGFTQTGT----SGXXXXXX 702
+ +P+HQD HYFP+ D +V ++ ++ NGCL V PG T G+
Sbjct: 170 SRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPG-THKGSLKPHDYPKWEGG 228
Query: 703 XKLSFC*SEKVPISXAK-PVIADRGDVVVFSYLLIHG 810
F + + A+ ++ ++GD V F LLIHG
Sbjct: 229 VNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHG 265
>AL138764-5|CAI12911.2| 338|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 338
Score = 76.2 bits (179), Expect = 2e-13
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Frame = +1
Query: 193 LTEEQKKFYEENGYIVLKNVLSEEDLCSITIEYNNLFNRKNQEKMESSWVGSDHNDRKHD 372
LT EQ+KFYEENG++V+KN++ + D+ E+ + + + K V D K +
Sbjct: 53 LTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRK--EVKPLGLTVMRDVTISKSE 110
Query: 373 KNFTVKGIHNLQFHHAVFSKFIFNDNLLDALEDV--MNTKNIIFHHTKAHYKPPEKG--- 537
+ K I +Q F + L + L+ V NI+ HT KPP+ G
Sbjct: 111 YAPSEKMITKVQDFQEDKELFRYC-TLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKT 169
Query: 538 AAYPMHQDYHYFPYE-KDSMVASFLHLDAADPKNGCLYVYPGFTQTGT----SGXXXXXX 702
+ +P+HQD HYFP+ D +V ++ ++ NGCL V PG T G+
Sbjct: 170 SRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPG-THKGSLKPHDYPKWEGG 228
Query: 703 XKLSFC*SEKVPISXAK-PVIADRGDVVVFSYLLIHG 810
F + + A+ ++ ++GD V F LLIHG
Sbjct: 229 VNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHG 265
>AF242386-1|AAF74123.1| 338|Homo sapiens phytanoyl-CoA hydroxylase
protein.
Length = 338
Score = 76.2 bits (179), Expect = 2e-13
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Frame = +1
Query: 193 LTEEQKKFYEENGYIVLKNVLSEEDLCSITIEYNNLFNRKNQEKMESSWVGSDHNDRKHD 372
LT EQ+KFYEENG++V+KN++ + D+ E+ + + + K V D K +
Sbjct: 53 LTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRK--EVKPLGLTVMRDVTISKSE 110
Query: 373 KNFTVKGIHNLQFHHAVFSKFIFNDNLLDALEDV--MNTKNIIFHHTKAHYKPPEKG--- 537
+ K I +Q F + L + L+ V NI+ HT KPP+ G
Sbjct: 111 YAPSEKMITKVQDFQEDKELFRYC-TLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKT 169
Query: 538 AAYPMHQDYHYFPYE-KDSMVASFLHLDAADPKNGCLYVYPGFTQTGT----SGXXXXXX 702
+ +P+HQD HYFP+ D +V ++ ++ NGCL V PG T G+
Sbjct: 170 SRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPG-THKGSLKPHDYPKWEGG 228
Query: 703 XKLSFC*SEKVPISXAK-PVIADRGDVVVFSYLLIHG 810
F + + A+ ++ ++GD V F LLIHG
Sbjct: 229 VNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHG 265
>AF112977-1|AAD20602.1| 338|Homo sapiens phytanoil-CoA alpha
hydroxylase protein.
Length = 338
Score = 76.2 bits (179), Expect = 2e-13
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Frame = +1
Query: 193 LTEEQKKFYEENGYIVLKNVLSEEDLCSITIEYNNLFNRKNQEKMESSWVGSDHNDRKHD 372
LT EQ+KFYEENG++V+KN++ + D+ E+ + + + K V D K +
Sbjct: 53 LTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRK--EVKPLGLTVMRDVTISKSE 110
Query: 373 KNFTVKGIHNLQFHHAVFSKFIFNDNLLDALEDV--MNTKNIIFHHTKAHYKPPEKG--- 537
+ K I +Q F + L + L+ V NI+ HT KPP+ G
Sbjct: 111 YAPSEKMITKVQDFQEDKELFRYC-TLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKT 169
Query: 538 AAYPMHQDYHYFPYE-KDSMVASFLHLDAADPKNGCLYVYPGFTQTGT----SGXXXXXX 702
+ +P+HQD HYFP+ D +V ++ ++ NGCL V PG T G+
Sbjct: 170 SRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPG-THKGSLKPHDYPKWEGG 228
Query: 703 XKLSFC*SEKVPISXAK-PVIADRGDVVVFSYLLIHG 810
F + + A+ ++ ++GD V F LLIHG
Sbjct: 229 VNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHG 265
>AF023462-1|AAB81834.1| 338|Homo sapiens peroxisomal phytanoyl-CoA
alpha-hydroxylase protein.
Length = 338
Score = 76.2 bits (179), Expect = 2e-13
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Frame = +1
Query: 193 LTEEQKKFYEENGYIVLKNVLSEEDLCSITIEYNNLFNRKNQEKMESSWVGSDHNDRKHD 372
LT EQ+KFYEENG++V+KN++ + D+ E+ + + + K V D K +
Sbjct: 53 LTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRK--EVKPLGLTVMRDVTISKSE 110
Query: 373 KNFTVKGIHNLQFHHAVFSKFIFNDNLLDALEDV--MNTKNIIFHHTKAHYKPPEKG--- 537
+ K I +Q F + L + L+ V NI+ HT KPP+ G
Sbjct: 111 YAPSEKMITKVQDFQEDKELFRYC-TLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKT 169
Query: 538 AAYPMHQDYHYFPYE-KDSMVASFLHLDAADPKNGCLYVYPGFTQTGT----SGXXXXXX 702
+ +P+HQD HYFP+ D +V ++ ++ NGCL V PG T G+
Sbjct: 170 SRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPG-THKGSLKPHDYPKWEGG 228
Query: 703 XKLSFC*SEKVPISXAK-PVIADRGDVVVFSYLLIHG 810
F + + A+ ++ ++GD V F LLIHG
Sbjct: 229 VNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHG 265
>AL138764-6|CAM15086.1| 321|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 321
Score = 74.5 bits (175), Expect = 5e-13
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 13/219 (5%)
Frame = +1
Query: 193 LTEEQKKFYEENGYIVLKNVLSEEDLCSITIEYNNLFNRKNQEKMESSWVGSDHNDRKHD 372
LT EQ+KFYEENG++V+KN++ + D+ E+ + + + K V D K +
Sbjct: 34 LTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRK--EVKPLGLTVMRDVTISKSE 91
Query: 373 KNFTVKGIHNLQFHHAVFSKFIFNDNLLDALEDV--MNTKNIIFHHTKAHYKPPEKG--- 537
+ K I +Q F + L + L+ V NI+ HT KPP+ G
Sbjct: 92 YAPSEKMITKVQDFQEDKELFRYC-TLPEILKYVECFTGPNIMAMHTMLINKPPDSGNCK 150
Query: 538 --AAYPMHQDYHYFPYE-KDSMVASFLHLDAADPKNGCLYVYPGFTQTGT----SGXXXX 696
+ +P+HQD HYFP+ D +V ++ ++ NGCL V PG T G+
Sbjct: 151 KTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPG-THKGSLKPHDYPKWE 209
Query: 697 XXXKLSFC*SEKVPISXAK-PVIADRGDVVVFSYLLIHG 810
F + + A+ ++ ++GD V F LLIHG
Sbjct: 210 GGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHG 248
>AL138764-4|CAI12910.1| 296|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 296
Score = 74.5 bits (175), Expect = 5e-13
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 13/219 (5%)
Frame = +1
Query: 193 LTEEQKKFYEENGYIVLKNVLSEEDLCSITIEYNNLFNRKNQEKMESSWVGSDHNDRKHD 372
LT EQ+KFYEENG++V+KN++ + D+ E+ + + + K V D K +
Sbjct: 71 LTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRK--EVKPLGLTVMRDVTISKSE 128
Query: 373 KNFTVKGIHNLQFHHAVFSKFIFNDNLLDALEDV--MNTKNIIFHHTKAHYKPPEKG--- 537
+ K I +Q F + L + L+ V NI+ HT KPP+ G
Sbjct: 129 YAPSEKMITKVQDFQEDKELFRYC-TLPEILKYVECFTGPNIMAMHTMLINKPPDSGNCK 187
Query: 538 --AAYPMHQDYHYFPYE-KDSMVASFLHLDAADPKNGCLYVYPGFTQTGT----SGXXXX 696
+ +P+HQD HYFP+ D +V ++ ++ NGCL V PG T G+
Sbjct: 188 KTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPG-THKGSLKPHDYPKWE 246
Query: 697 XXXKLSFC*SEKVPISXAK-PVIADRGDVVVFSYLLIHG 810
F + + A+ ++ ++GD V F LLIHG
Sbjct: 247 GGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHG 285
>CR542055-1|CAG46852.1| 338|Homo sapiens PHYH protein.
Length = 338
Score = 74.1 bits (174), Expect = 6e-13
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 10/216 (4%)
Frame = +1
Query: 193 LTEEQKKFYEENGYIVLKNVLSEEDLCSITIEYNNLFNRKNQEKMESSWVGSDHNDRKHD 372
LT EQ+KFYEENG++V+KN++ + D+ E+ + + + K V D K +
Sbjct: 53 LTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRK--EVKPLGLTVMRDVTISKSE 110
Query: 373 KNFTVKGIHNLQFHHAVFSKFIFNDNLLDALEDV--MNTKNIIFHHTKAHYKPPEKG--- 537
+ K I +Q F + L + L+ V NI+ HT KPP+ G
Sbjct: 111 YAPSEKMITKVQDFQEDKELFRYC-TLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKT 169
Query: 538 AAYPMHQDYHYFPYE-KDSMVASFLHLDAADPKNGCLYVYP----GFTQTGTSGXXXXXX 702
+ +P+HQD HYFP+ D +V ++ ++ NGCL V P G +
Sbjct: 170 SRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPDTHKGSLKPHDYPKWEGGV 229
Query: 703 XKLSFC*SEKVPISXAKPVIADRGDVVVFSYLLIHG 810
K+ + ++ ++GD V F LLIHG
Sbjct: 230 NKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHG 265
>BC125232-1|AAI25233.1| 1500|Homo sapiens ABCA6 protein protein.
Length = 1500
Score = 32.7 bits (71), Expect = 1.9
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 690 LALKKETFILLIRKSSYIXSETGDRRSWRCGSILLSTDPRAVLLTTHIVRDVCCSCKRXP 869
L+L + +LL+ + S TG ++ W+ ++ R VLLTTH + + C R
Sbjct: 1425 LSLLGNSPVLLLDEPSTGIDPTGQQQMWQAIQAVVKNTERGVLLTTHNLAEAEALCDRVA 1484
Query: 870 XM 875
M
Sbjct: 1485 IM 1486
>BC125231-1|AAI25232.1| 1500|Homo sapiens ABCA6 protein protein.
Length = 1500
Score = 32.7 bits (71), Expect = 1.9
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 690 LALKKETFILLIRKSSYIXSETGDRRSWRCGSILLSTDPRAVLLTTHIVRDVCCSCKRXP 869
L+L + +LL+ + S TG ++ W+ ++ R VLLTTH + + C R
Sbjct: 1425 LSLLGNSPVLLLDEPSTGIDPTGQQQMWQAIQAVVKNTERGVLLTTHNLAEAEALCDRVA 1484
Query: 870 XM 875
M
Sbjct: 1485 IM 1486
>AY028898-1|AAK30023.1| 1617|Homo sapiens ATP-binding cassette A6
protein.
Length = 1617
Score = 32.7 bits (71), Expect = 1.9
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 690 LALKKETFILLIRKSSYIXSETGDRRSWRCGSILLSTDPRAVLLTTHIVRDVCCSCKRXP 869
L+L + +LL+ + S TG ++ W+ ++ R VLLTTH + + C R
Sbjct: 1425 LSLLGNSPVLLLDEPSTGIDPTGQQQMWQAIQAVVKNTERGVLLTTHNLAEAEALCDRVA 1484
Query: 870 XM 875
M
Sbjct: 1485 IM 1486
>AK097296-1|BAC04994.1| 815|Homo sapiens protein ( Homo sapiens
cDNA FLJ39977 fis, clone SPLEN2029295, moderately
similar to ATP-binding cassette, sub-family A member 8.
).
Length = 815
Score = 32.7 bits (71), Expect = 1.9
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 690 LALKKETFILLIRKSSYIXSETGDRRSWRCGSILLSTDPRAVLLTTHIVRDVCCSCKRXP 869
L+L + +LL+ + S TG ++ W+ ++ R VLLTTH + + C R
Sbjct: 623 LSLLGNSPVLLLDEPSTGIDPTGQQQMWQAIQAVVKNTERGVLLTTHNLAEAEALCDRVA 682
Query: 870 XM 875
M
Sbjct: 683 IM 684
>AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6
protein.
Length = 1617
Score = 32.7 bits (71), Expect = 1.9
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 690 LALKKETFILLIRKSSYIXSETGDRRSWRCGSILLSTDPRAVLLTTHIVRDVCCSCKRXP 869
L+L + +LL+ + S TG ++ W+ ++ R VLLTTH + + C R
Sbjct: 1425 LSLLGNSPVLLLDEPSTGIDPTGQQQMWQAIQAVVKNTERGVLLTTHNLAEAEALCDRVA 1484
Query: 870 XM 875
M
Sbjct: 1485 IM 1486
>AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6
protein.
Length = 1617
Score = 32.7 bits (71), Expect = 1.9
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 690 LALKKETFILLIRKSSYIXSETGDRRSWRCGSILLSTDPRAVLLTTHIVRDVCCSCKRXP 869
L+L + +LL+ + S TG ++ W+ ++ R VLLTTH + + C R
Sbjct: 1425 LSLLGNSPVLLLDEPSTGIDPTGQQQMWQAIQAVVKNTERGVLLTTHNLAEAEALCDRVA 1484
Query: 870 XM 875
M
Sbjct: 1485 IM 1486
>BC053853-1|AAH53853.1| 291|Homo sapiens PHYHD1 protein protein.
Length = 291
Score = 31.9 bits (69), Expect = 3.4
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +1
Query: 397 HNLQFHHAVFSKFIFNDNLLDALEDVMNTKNIIFHHTKAHYKPPEKGAAYPMHQDYHYFP 576
H L H VF K I + + L + + + + +K P G HQD +
Sbjct: 105 HALHAHDPVF-KSITHSFKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASFLY 163
Query: 577 YEKDSMVAS-FLHLDAADPKNGCLYVYPGFTQTGTS 681
E V ++ ++ A +NGCL+ PG +G S
Sbjct: 164 TEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVS 199
>AL672142-6|CAI10842.1| 291|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 291
Score = 31.9 bits (69), Expect = 3.4
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +1
Query: 397 HNLQFHHAVFSKFIFNDNLLDALEDVMNTKNIIFHHTKAHYKPPEKGAAYPMHQDYHYFP 576
H L H VF K I + + L + + + + +K P G HQD +
Sbjct: 105 HALHAHDPVF-KSITHSFKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASFLY 163
Query: 577 YEKDSMVAS-FLHLDAADPKNGCLYVYPGFTQTGTS 681
E V ++ ++ A +NGCL+ PG +G S
Sbjct: 164 TEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVS 199
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,289,082
Number of Sequences: 237096
Number of extensions: 2639009
Number of successful extensions: 5258
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5244
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -