Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_N08
(980 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.058
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.058
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.058
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.077
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.077
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.077
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 35 0.10
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 35 0.10
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 33 0.31
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 33 0.41
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.72
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.72
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 0.95
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 0.95
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 0.95
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 0.95
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 0.95
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 31 0.95
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.3
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 3.8
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 29 3.8
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 3.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 5.1
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 5.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 5.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.058
Identities = 30/90 (33%), Positives = 30/90 (33%), Gaps = 2/90 (2%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPP 364
PP G P G PPPP GG G PPP P P G PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPPGGLPPISG----GPP 759
Query: 363 XXXPPXXNXHPFXLXXXFXPPXHGG--GGP 280
PP P PP GG GGP
Sbjct: 760 PPPPPPGGCPP-----PPPPPPPGGFKGGP 784
Score = 34.7 bits (76), Expect = 0.10
Identities = 25/84 (29%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPG---XKXXXPXXGRXXX 373
PP G P I G PPPP GG PPP PG P G
Sbjct: 730 PPPGGLPPITGG-------PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Query: 372 XPPXXXPPXXNXHPFXLXXXFXPP 301
PP PP + + PP
Sbjct: 783 GPPPPPPPGMFAPMAPVIPDYLPP 806
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = -3
Query: 480 PPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPPXXNXHPFXLXXXFXPP 301
P GG G PPP PG G PP PP P PP
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPI--TGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Query: 300 XHGGGGP 280
GG P
Sbjct: 754 ISGGPPP 760
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/78 (30%), Positives = 24/78 (30%)
Frame = -3
Query: 483 PPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPPXXNXHPFXLXXXFXP 304
PPPP G G PPP P G PP PP P P
Sbjct: 713 PPPPPGLPPITG----GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP-------PP 761
Query: 303 PXHGGGGPXRXXTXPXGG 250
P GG P P GG
Sbjct: 762 PPPPGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.058
Identities = 30/90 (33%), Positives = 30/90 (33%), Gaps = 2/90 (2%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPP 364
PP G P G PPPP GG G PPP P P G PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPPGGLPPISG----GPP 759
Query: 363 XXXPPXXNXHPFXLXXXFXPPXHGG--GGP 280
PP P PP GG GGP
Sbjct: 760 PPPPPPGGCPP-----PPPPPPPGGFKGGP 784
Score = 34.7 bits (76), Expect = 0.10
Identities = 25/84 (29%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPG---XKXXXPXXGRXXX 373
PP G P I G PPPP GG PPP PG P G
Sbjct: 730 PPPGGLPPITGG-------PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Query: 372 XPPXXXPPXXNXHPFXLXXXFXPP 301
PP PP + + PP
Sbjct: 783 GPPPPPPPGMFAPMAPVIPDYLPP 806
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = -3
Query: 480 PPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPPXXNXHPFXLXXXFXPP 301
P GG G PPP PG G PP PP P PP
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPI--TGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Query: 300 XHGGGGP 280
GG P
Sbjct: 754 ISGGPPP 760
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/78 (30%), Positives = 24/78 (30%)
Frame = -3
Query: 483 PPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPPXXNXHPFXLXXXFXP 304
PPPP G G PPP P G PP PP P P
Sbjct: 713 PPPPPGLPPITG----GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP-------PP 761
Query: 303 PXHGGGGPXRXXTXPXGG 250
P GG P P GG
Sbjct: 762 PPPPGGCPPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.058
Identities = 30/90 (33%), Positives = 30/90 (33%), Gaps = 2/90 (2%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPP 364
PP G P G PPPP GG G PPP P P G PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPPGGLPPISG----GPP 342
Query: 363 XXXPPXXNXHPFXLXXXFXPPXHGG--GGP 280
PP P PP GG GGP
Sbjct: 343 PPPPPPGGCPP-----PPPPPPPGGFKGGP 367
Score = 34.7 bits (76), Expect = 0.10
Identities = 25/84 (29%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPG---XKXXXPXXGRXXX 373
PP G P I G PPPP GG PPP PG P G
Sbjct: 313 PPPGGLPPITGG-------PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 365
Query: 372 XPPXXXPPXXNXHPFXLXXXFXPP 301
PP PP + + PP
Sbjct: 366 GPPPPPPPGMFAPMAPVIPDYLPP 389
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = -3
Query: 480 PPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPPXXNXHPFXLXXXFXPP 301
P GG G PPP PG G PP PP P PP
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPI--TGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 336
Query: 300 XHGGGGP 280
GG P
Sbjct: 337 ISGGPPP 343
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/78 (30%), Positives = 24/78 (30%)
Frame = -3
Query: 483 PPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPPXXNXHPFXLXXXFXP 304
PPPP G G PPP P G PP PP P P
Sbjct: 296 PPPPPGLPPITG----GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP-------PP 344
Query: 303 PXHGGGGPXRXXTXPXGG 250
P GG P P GG
Sbjct: 345 PPPPGGCPPPPPPPPPGG 362
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.077
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPP 364
PP G P G PP G G+PPP P K P PP
Sbjct: 291 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 350
Query: 363 XXXPP 349
PP
Sbjct: 351 TGSPP 355
Score = 32.3 bits (70), Expect = 0.54
Identities = 23/90 (25%), Positives = 24/90 (26%), Gaps = 2/90 (2%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAP--PPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXX 370
PP G P + A PPP G PPP G P G
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Query: 369 PPXXXPPXXNXHPFXLXXXFXPPXHGGGGP 280
PP P P PP G P
Sbjct: 301 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Score = 31.5 bits (68), Expect = 0.95
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = -3
Query: 435 GTPPPXPGXKXXXPXXGRXXXXPP---XXXPPXXNXHPFXLXXXFXPPXHGGGGP 280
G+PPP P K P G PP PP P PP GG P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 289
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -3
Query: 483 PPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPP 349
PPPP G G+PPP P P PP PP
Sbjct: 238 PPPPPPKGSPPL-AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 281
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.077
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPP 364
PP G P G PP G G+PPP P K P PP
Sbjct: 312 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 371
Query: 363 XXXPP 349
PP
Sbjct: 372 TGSPP 376
Score = 32.3 bits (70), Expect = 0.54
Identities = 23/90 (25%), Positives = 24/90 (26%), Gaps = 2/90 (2%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAP--PPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXX 370
PP G P + A PPP G PPP G P G
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Query: 369 PPXXXPPXXNXHPFXLXXXFXPPXHGGGGP 280
PP P P PP G P
Sbjct: 322 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Score = 31.5 bits (68), Expect = 0.95
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = -3
Query: 435 GTPPPXPGXKXXXPXXGRXXXXPP---XXXPPXXNXHPFXLXXXFXPPXHGGGGP 280
G+PPP P K P G PP PP P PP GG P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 310
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -3
Query: 483 PPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPP 349
PPPP G G+PPP P P PP PP
Sbjct: 259 PPPPPPKGSPPL-AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 302
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.077
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPP 364
PP G P G PP G G+PPP P K P PP
Sbjct: 297 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 356
Query: 363 XXXPP 349
PP
Sbjct: 357 TGSPP 361
Score = 32.3 bits (70), Expect = 0.54
Identities = 23/90 (25%), Positives = 24/90 (26%), Gaps = 2/90 (2%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAP--PPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXX 370
PP G P + A PPP G PPP G P G
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Query: 369 PPXXXPPXXNXHPFXLXXXFXPPXHGGGGP 280
PP P P PP G P
Sbjct: 307 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Score = 31.5 bits (68), Expect = 0.95
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = -3
Query: 435 GTPPPXPGXKXXXPXXGRXXXXPP---XXXPPXXNXHPFXLXXXFXPPXHGGGGP 280
G+PPP P K P G PP PP P PP GG P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 295
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -3
Query: 483 PPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPP 349
PPPP G G+PPP P P PP PP
Sbjct: 244 PPPPPPKGSPPL-AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 287
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 34.7 bits (76), Expect = 0.10
Identities = 26/89 (29%), Positives = 29/89 (32%), Gaps = 1/89 (1%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPP 364
P P + G + PPPP G A+ RG PPP P G PP
Sbjct: 81 PSGPSGPPVYHNQGPPRGYPPPPPQG-----ADTWRGAPPPAHHGHFGPP--GHHFQGPP 133
Query: 363 XXXPP-XXNXHPFXLXXXFXPPXHGGGGP 280
PP H PP H G P
Sbjct: 134 QHFPPGPPRPHFPGPPGPHRPPEHYPGPP 162
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPP 364
PP G P G G + PPP G G PPP G P PP
Sbjct: 1554 PPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 33.1 bits (72), Expect = 0.31
Identities = 22/71 (30%), Positives = 22/71 (30%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPP 364
PP G P G G PPPP G G PPP G G PP
Sbjct: 108 PPPTGEPQDLSGEGNASRRPPPPPKGTG--------SPPPPPTGEPQDLSGEGNASRRPP 159
Query: 363 XXXPPXXNXHP 331
PP P
Sbjct: 160 --PPPKGTGSP 168
Score = 32.7 bits (71), Expect = 0.41
Identities = 22/71 (30%), Positives = 22/71 (30%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPP 364
PP G P G G PPPP G G PPP G G PP
Sbjct: 232 PPPTGEPQDLSGEGNASRRPPPPPKGTG--------SPPPPPTGEPQDLSGEGNASRRPP 283
Query: 363 XXXPPXXNXHP 331
PP P
Sbjct: 284 --PPPKGTGTP 292
Score = 31.5 bits (68), Expect = 0.95
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXP 415
PP G P G G PPPP G GTPPP P
Sbjct: 45 PPPTGEPQDLSGEGNASRRPPPPPKG---------TGTPPPPP 78
Score = 30.7 bits (66), Expect = 1.7
Identities = 28/99 (28%), Positives = 28/99 (28%), Gaps = 1/99 (1%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXP-GXKXXXPXXGRXXXXP 367
PP G P G PPPP G GTPPP P G G P
Sbjct: 170 PPPTGEPQDLSTEGNASRRPPPPPKG---------TGTPPPPPTGEPQDLSAEGYASRRP 220
Query: 366 PXXXPPXXNXHPFXLXXXFXPPXHGGGGPXRXXTXPXGG 250
P PP P G G R P G
Sbjct: 221 P--PPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKG 257
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/72 (31%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = -3
Query: 543 PPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXP-GXKXXXPXXGRXXXXP 367
PP G P G PPPP K GTPPP P G G P
Sbjct: 76 PPPTGEPQDLSAEEGNASRRPPPP--------PKGTGTPPPPPTGEPQDLSGEGNASRRP 127
Query: 366 PXXXPPXXNXHP 331
P PP P
Sbjct: 128 P--PPPKGTGSP 137
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 32.7 bits (71), Expect = 0.41
Identities = 26/100 (26%), Positives = 27/100 (27%)
Frame = -3
Query: 549 GXPPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXX 370
G PP G P + G PP P G G PP P G
Sbjct: 159 GAPPSGGPPGLFDPSGAPPSGGPPGPFG---PSGAPPSGGPPGPFNPSEAPPSGGPTGPF 215
Query: 369 PPXXXPPXXNXHPFXLXXXFXPPXHGGGGPXRXXTXPXGG 250
P PP P PP G GP P G
Sbjct: 216 DPSGAPPSGGP-PGPFNPSGAPPSGGPPGPFDPSGAPPSG 254
Score = 28.7 bits (61), Expect = 6.7
Identities = 25/100 (25%), Positives = 25/100 (25%)
Frame = -3
Query: 549 GXPPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXX 370
G PP G P G PP P G PP P G
Sbjct: 324 GAPPSGGPPGPFDPSGAPPSGGPPGPFN---PSGAPPSGGPPGPFDPSGAPPSGGPPGPF 380
Query: 369 PPXXXPPXXNXHPFXLXXXFXPPXHGGGGPXRXXTXPXGG 250
P PP P PP G GP P G
Sbjct: 381 DPSGAPPSGGP-PGPFDPSGAPPSGGPPGPFNPSGAPPSG 419
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.72
Identities = 22/75 (29%), Positives = 26/75 (34%)
Frame = -3
Query: 483 PPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPPXXNXHPFXLXXXFXP 304
PPPP G G PPP P + P G PP PP +P + P
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG---GMPP--PPPPGMRYPGGMPPP-PP 352
Query: 303 PXHGGGGPXRXXTXP 259
P + GP P
Sbjct: 353 PRYPSAGPGMYPPPP 367
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.72
Identities = 22/75 (29%), Positives = 26/75 (34%)
Frame = -3
Query: 483 PPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPPXXNXHPFXLXXXFXP 304
PPPP G G PPP P + P G PP PP +P + P
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG---GMPP--PPPPGMRYPGGMPPP-PP 362
Query: 303 PXHGGGGPXRXXTXP 259
P + GP P
Sbjct: 363 PRYPSAGPGMYPPPP 377
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.5 bits (68), Expect = 0.95
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = -3
Query: 483 PPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPPXXNXHPFXLXXXFXP 304
PPPP G PPP P P G PP PP P + P
Sbjct: 614 PPPPQSFGMAPISSA-APPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 672
Query: 303 PXHG 292
G
Sbjct: 673 AQDG 676
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.5 bits (68), Expect = 0.95
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = -3
Query: 483 PPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPPXXNXHPFXLXXXFXP 304
PPPP G PPP P P G PP PP P + P
Sbjct: 440 PPPPQSFGMAPISSA-APPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 498
Query: 303 PXHG 292
G
Sbjct: 499 AQDG 502
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.5 bits (68), Expect = 0.95
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -3
Query: 486 APPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPP 349
APPPP GG G PPP P P G PP PP
Sbjct: 217 APPPPIGG--IAPVNAHGAPPPPP-----LPPVGAGAPPPPPPPPP 255
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 31.5 bits (68), Expect = 0.95
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -3
Query: 486 APPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPP 349
APPPP GG G PPP P P G PP PP
Sbjct: 203 APPPPIGG--IAPVNAHGAPPPPP-----LPPVGAGAPPPPPPPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.5 bits (68), Expect = 0.95
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -3
Query: 486 APPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPP 349
APPPP GG G PPP P P G PP PP
Sbjct: 203 APPPPIGG--IAPVNAHGAPPPPP-----LPPVGAGAPPPPPPPPP 241
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 31.5 bits (68), Expect = 0.95
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -3
Query: 525 PXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXG 385
P G GG APPPP A G PP P P G
Sbjct: 20 PSAGGGGGGCGCGAPPPPPACAPPPAPACGGGAPPPPAYAAPAPSYG 66
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -3
Query: 510 GXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPPXXXPPXXNXHP 331
G GG PPPP G G A G P PG P G PP P P
Sbjct: 402 GPGGPGGYGPPPPGGPG---APGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPP 458
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.8
Identities = 26/99 (26%), Positives = 31/99 (31%), Gaps = 13/99 (13%)
Frame = -3
Query: 510 GXGGXKXXAPPPPXG----GGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPP------- 364
G G PPPP G GG + G P P + P + PP
Sbjct: 672 GPPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRG 731
Query: 363 -XXXPPXXNXHPFXL-XXXFXPPXHGGGGPXRXXTXPXG 253
PP HP+ PP HG P + P G
Sbjct: 732 YGYPPPPQPGHPYQQPYGQMPPPPHGQYQPQQQQGGPMG 770
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 381 FAPXXGPXFFXXXGGXGSPLXFPXKXXPPPXGGG 482
F GP + GG G P P + P P GGG
Sbjct: 4 FGGPGGPMYGGAGGGGGGPPRGPPQQPPQPQGGG 37
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.8
Identities = 26/99 (26%), Positives = 31/99 (31%), Gaps = 13/99 (13%)
Frame = -3
Query: 510 GXGGXKXXAPPPPXG----GGXXXAEKXRGTPPPXPGXKXXXPXXGRXXXXPP------- 364
G G PPPP G GG + G P P + P + PP
Sbjct: 672 GPPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRG 731
Query: 363 -XXXPPXXNXHPFXL-XXXFXPPXHGGGGPXRXXTXPXG 253
PP HP+ PP HG P + P G
Sbjct: 732 YGYPPPPQPGHPYQQPYGQMPPPPHGQYQPQQQQGGPMG 770
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -3
Query: 549 GXPPXXGXPXIXXGXGGXKXXAPPPPXGGGXXXAEKXRGTPPPXP 415
G P P G APPPP G TPPP P
Sbjct: 498 GHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPP 542
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.1 bits (62), Expect = 5.1
Identities = 26/88 (29%), Positives = 30/88 (34%)
Frame = +2
Query: 281 GPPPPXXGGXXXXSRXKGWXXXFGGXXXGGXXXXRPXXGXXFFXPXXXXXVPLXFSAKXX 460
GPPP GG ++ GG GG P F P + F+
Sbjct: 100 GPPPGMPGGVPPQAQP---FNPHGGSMFGGPGG--PGGPPPFGQPFQQAPQGM-FNVPTG 153
Query: 461 PPPXGGGGAXXFXPPXPXXXXGSPXXGG 544
PPP GGG P P G P GG
Sbjct: 154 PPPLMGGGGDPRGP--PGGMGGPPGHGG 179
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.1 bits (62), Expect = 5.1
Identities = 26/88 (29%), Positives = 30/88 (34%)
Frame = +2
Query: 281 GPPPPXXGGXXXXSRXKGWXXXFGGXXXGGXXXXRPXXGXXFFXPXXXXXVPLXFSAKXX 460
GPPP GG ++ GG GG P F P + F+
Sbjct: 380 GPPPGMPGGVPPQAQP---FNPHGGSMFGGPGG--PGGPPPFGQPFQQAPQGM-FNVPTG 433
Query: 461 PPPXGGGGAXXFXPPXPXXXXGSPXXGG 544
PPP GGG P P G P GG
Sbjct: 434 PPPLMGGGGDPRGP--PGGMGGPPGHGG 459
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,754,686
Number of Sequences: 27780
Number of extensions: 221350
Number of successful extensions: 1316
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2552786072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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