Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_N07
(849 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 0.49
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 32 0.66
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 0.88
02_05_0686 - 30900748-30902167,30903442-30904742 31 0.88
01_03_0005 + 11568545-11569119,11569179-11569191 31 1.2
09_02_0495 + 9880714-9881196 31 1.5
10_08_0827 + 20849312-20849833,20850352-20850417,20850786-208510... 30 2.0
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 30 2.0
01_06_0046 + 25943183-25943590 30 2.0
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 3.5
07_01_0479 + 3606663-3607448 29 4.7
07_03_1136 + 24218601-24218734,24218769-24219906 29 6.2
05_02_0161 + 7199005-7199505,7200118-7200378,7201532-7201621 28 8.2
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 557 PPPPPXXXXXXPPPXXXGGFFFXFXXPPP 643
PPPPP PP G F PPP
Sbjct: 639 PPPPPSLPNRLVPPPPAPGIGNKFPAPPP 667
Score = 27.5 bits (58), Expect(2) = 0.49
Identities = 20/76 (26%), Positives = 20/76 (26%), Gaps = 3/76 (3%)
Frame = -2
Query: 761 PPPPXXXXXXXXXXXXXXXXXKKXXXXXXPPPPXXFXXXXGGGXXXKKKNPPXXXXXGXX 582
PPPP K PPPP G K PP
Sbjct: 640 PPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPP 699
Query: 581 XXXXGGGG---APPPP 543
G G APPPP
Sbjct: 700 ANRTNGPGVPSAPPPP 715
Score = 23.4 bits (48), Expect(2) = 0.49
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -2
Query: 557 APPPPXXXXXXXXXXXXPPPP 495
APPPP PPPP
Sbjct: 749 APPPPPLMTGKKAPAPPPPPP 769
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +2
Query: 545 GGGGPPPPPXXXXXXPPPXXXGGFFFXFXXPPPXXXKXXXGGGG 676
G G PPPPP P P G PPP GGGG
Sbjct: 346 GSGPPPPPPPAAPAAPRPPGPG------PGPPPPPGAAGRGGGG 383
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/78 (28%), Positives = 23/78 (29%)
Frame = -1
Query: 777 GGXXXPPPPPXXXXXQXXXXXXXXXKXKXXXXXXPPPPXXFFXXXGGGXXXKKKKPPXXX 598
GG PPPP + PPPP GG PP
Sbjct: 1116 GGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPV------GGLGGPPAPPPPAGF 1169
Query: 597 GGGXXXXXXGGGGGPPPP 544
GG GG PPPP
Sbjct: 1170 RGGTPPPNAHGGVAPPPP 1187
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +2
Query: 545 GGGGPPPPPXXXXXXPPPXXXGGFFFXFXXPPPXXXKXXXGGGG 676
G PPPP PPP GG PPP + G GG
Sbjct: 1159 GPPAPPPPAGFRGGTPPPNAHGG-----VAPPPPPPRGHGGVGG 1197
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +2
Query: 545 GGGGPPPPPXXXXXXPPPXXXGGFFFXFXXPPPXXXKXXXG 667
G PPPPP PPP GG P P + G
Sbjct: 1107 GAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGG 1147
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/68 (26%), Positives = 18/68 (26%)
Frame = +2
Query: 407 FXXGAPPPXXXXXSXPPPXXXXXXXXXXXXXXXAXXXXXXXXXXXXGGGGPPPPPXXXXX 586
F G PPP PPP GGPPPPP
Sbjct: 1169 FRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVP--GGPPPPPGGRGL 1226
Query: 587 XPPPXXXG 610
PP G
Sbjct: 1227 PAPPGGRG 1234
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 551 GGPPPPPXXXXXXPPPXXXGGFFFXFXXPPP 643
G PPPPP PPP GG PPP
Sbjct: 352 GPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 554 GPPPPPXXXXXXPPPXXXGGFFFXFXXPPPXXXKXXXGG 670
GPPPPP PPP G PPP GG
Sbjct: 343 GPPPPPPAKGPPPPPPPKGP-----SPPPPPPPGGKKGG 376
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = -1
Query: 675 PPP--PXXFFXXXGGGXXXKKKKPPXXXGGGXXXXXXGGGGGPPPP 544
PPP P GGG PP GGG GGG PPP
Sbjct: 71 PPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPP 116
>09_02_0495 + 9880714-9881196
Length = 160
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 545 GGGGPPPPPXXXXXXPPPXXXGGFFFXFXXPPP 643
GG PPPPP P GGF + PPP
Sbjct: 76 GGTYPPPPPGVMPGAFAPPFGGGFPYGPAPPPP 108
>10_08_0827 +
20849312-20849833,20850352-20850417,20850786-20851082,
20851215-20851412,20851748-20851849,20851960-20852100,
20852171-20852278,20852588-20852670,20852829-20852991,
20853636-20853650,20853968-20854093
Length = 606
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -1
Query: 675 PPPPXXFFXXXGGGXXXKKKKPPXXXGGGXXXXXXGGGGGPPPP 544
PPPP G + +PP GGG GG GG PP
Sbjct: 17 PPPPPLVSPRLRRGHVRLRLRPPRSSGGG----GGGGAGGDEPP 56
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 557 PPPPPXXXXXXPPPXXXGGFFFXFXXPPP 643
PPPPP PPP GG F PP
Sbjct: 8 PPPPPPPPQHPPPPQAGGGGGGEFYRGPP 36
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 557 PPPPPXXXXXXPPPXXXGGFFFXFXXPPP 643
PPPPP PP GG + PPP
Sbjct: 9 PPPPPPPQHPPPPQAGGGGGGEFYRGPPP 37
>01_06_0046 + 25943183-25943590
Length = 135
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +2
Query: 557 PPPPPXXXXXXPPPXXXGGFFFXFXXPPPXXXKXXXGGG 673
PPPPP PPP G + PPP GGG
Sbjct: 56 PPPPPYYYYSPPPPAYYPGSY----CPPPPAAYVQFGGG 90
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -1
Query: 672 PPPXXFFXXXGGGXXXKKKKPPXXXGGGXXXXXXGGGG-GPPPP 544
PPP + GG + PP GG GGGG G PPP
Sbjct: 357 PPPNPPYS--GGAPGGQGSLPPSYDGGYGGRPMPGGGGPGAPPP 398
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 551 GGPPPPPXXXXXXPPP 598
GGPPPPP PPP
Sbjct: 199 GGPPPPPGPFMRGPPP 214
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 642 GGGXXXKKKKPPXXXGGGXXXXXXGGGGG 556
GGG KP GGG GGGGG
Sbjct: 376 GGGGGGMLDKPDEAGGGGGGGSGGGGGGG 404
>05_02_0161 + 7199005-7199505,7200118-7200378,7201532-7201621
Length = 283
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 548 GGGPPPPPXXXXXXPPPXXXGG 613
G PPPPP PPP GG
Sbjct: 47 GDLPPPPPDDGGEFPPPPDDGG 68
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,253,353
Number of Sequences: 37544
Number of extensions: 683364
Number of successful extensions: 4224
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3281
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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