Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_N05
         (896 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   2.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   2.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   2.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   8.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   8.7  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 657 CRLLETCDEMCLYTEVLIKCS 595
           C+L  TCD +C    +L  C+
Sbjct: 109 CKLWLTCDVLCCTASILNLCA 129


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 657 CRLLETCDEMCLYTEVLIKCS 595
           C+L  TCD +C    +L  C+
Sbjct: 109 CKLWLTCDVLCCTASILNLCA 129


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 657 CRLLETCDEMCLYTEVLIKCS 595
           C+L  TCD +C    +L  C+
Sbjct: 109 CKLWLTCDVLCCTASILNLCA 129


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 142 WKKTRVNFYYVFNLTVTLKKKIR 210
           W+K R +     NLT TL K IR
Sbjct: 875 WQKERTHRPTFANLTQTLDKLIR 897



 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 417 WRKKRVNFYYVLNLTVTVKKKIR 485
           W+K+R +     NLT T+ K IR
Sbjct: 875 WQKERTHRPTFANLTQTLDKLIR 897


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 192 IEKKN*AFLNQVQIVT*STFFFYEYFR 272
           + K+N AF NQ+Q V+ +   F   FR
Sbjct: 460 LTKQNTAFENQLQFVSDAVMAFAYAFR 486



 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 300 VQLGFYPLFFGNIRKKKMLIT*LSV 226
           + L F PL+FG      + IT +SV
Sbjct: 860 IWLAFVPLYFGTGNNVALRITSMSV 884


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,767
Number of Sequences: 438
Number of extensions: 5671
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)