Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_M24
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0040 - 13999040-13999179,13999524-13999638,13999759-139998...    35   0.10 
01_06_1680 - 39123536-39123628,39123726-39123821,39123941-391240...    34   0.14 
05_07_0262 + 28769335-28769391,28769732-28769855,28770175-287702...    29   5.1  
01_05_0782 - 25148733-25149166,25149252-25149415,25149636-251496...    29   6.8  

>03_03_0040 -
           13999040-13999179,13999524-13999638,13999759-13999818,
           14000007-14000060,14000274-14000333,14000418-14000480,
           14000552-14000595,14000671-14000755,14000904-14001028,
           14001368-14001432,14001460-14001518,14001678-14001743,
           14001870-14001935,14002019-14002105,14002168-14002257,
           14002378-14002440,14003153-14003419
          Length = 502

 Score = 34.7 bits (76), Expect = 0.10
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = +2

Query: 155 MTIRTSVNINGWLKLQGDSSYLARGSIKMSFGRICIGFTSG 277
           M I  ++ I GWL L     +LA+G I + FGRI +GF++G
Sbjct: 151 MRISATICIFGWLSL-----HLAKGVIMLYFGRILLGFSTG 186


>01_06_1680 -
           39123536-39123628,39123726-39123821,39123941-39124093,
           39124273-39124382,39124601-39124757,39124867-39124877,
           39125138-39125228,39125401-39125496,39125605-39125724,
           39125914-39125978,39126066-39126168,39126406-39126631,
           39126714-39126790
          Length = 465

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 23/68 (33%), Positives = 33/68 (48%)
 Frame = +3

Query: 381 SIEGVPLAKIPHDWADYEPDNAGGDSNCILMYPDGNFADVNCTDTFQYVCYKKKTSTVAM 560
           SI G  L   P D+ D EPD     ++ I+     N  D  C    + +C++KK  TV  
Sbjct: 347 SIYGKQLMIDPQDFQDAEPDILANSASEIINRIKEN--DDQCAMALRSLCHRKKGLTVEE 404

Query: 561 SSCGSVDS 584
           +S  S+DS
Sbjct: 405 ASLISIDS 412


>05_07_0262 +
           28769335-28769391,28769732-28769855,28770175-28770266,
           28770673-28771078,28772057-28772184,28772273-28772332,
           28772814-28772963,28772999-28773061,28773062-28773217,
           28773361-28773572,28773698-28773796,28774343-28774512,
           28774592-28775040
          Length = 721

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = +3

Query: 378 RSIEGVPLAKIPHDWADYEPDNAGGDSNCILMYPDGNFADVNCTDTFQYVCYKKKTST-- 551
           R+++ +  A + H   D +P N   +SNC L   D   A V   DT   V +    +T  
Sbjct: 219 RALKYIHTASVYH--RDLKPKNILANSNCKLKICDFGLARVAFNDTPTTVFWTDYVATRW 276

Query: 552 -VAMSSCGSVDSEYT 593
             A   CGS  S+YT
Sbjct: 277 YRAPELCGSFFSKYT 291


>01_05_0782 -
           25148733-25149166,25149252-25149415,25149636-25149664,
           25150049-25150109,25150264-25150475,25150587-25150742,
           25150837-25150986,25151486-25151545,25151653-25151780,
           25152399-25152807,25153087-25153106,25153916-25154048
          Length = 651

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = +3

Query: 378 RSIEGVPLAKIPHDWADYEPDNAGGDSNCILMYPDGNFADVNCTDTFQYVCYKKKTST-- 551
           R+++ +  A + H   D +P N   +SNC L   D   A V   DT   + +    +T  
Sbjct: 180 RALKYIHTANVYH--RDLKPKNILANSNCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 237

Query: 552 -VAMSSCGSVDSEYT 593
             A   CGS  S+YT
Sbjct: 238 YRAPELCGSFFSKYT 252


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,599,197
Number of Sequences: 37544
Number of extensions: 321768
Number of successful extensions: 717
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)