Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_M24
         (912 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical pr...    42   5e-04
AL031627-2|CAA20953.1|  179|Caenorhabditis elegans Hypothetical ...    32   0.65 
AL031627-8|CAA20960.2|  222|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z81542-2|CAB04416.1|  228|Caenorhabditis elegans Hypothetical pr...    31   1.5  
U64848-13|AAY86245.1|  339|Caenorhabditis elegans Hypothetical p...    31   1.5  
Z82070-6|CAB04910.1|  321|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AC006663-2|AAF39900.2|  603|Caenorhabditis elegans Hypothetical ...    29   6.1  
Z82260-2|CAB05130.1|  344|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z81083-2|CAB03101.3|  646|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical
           protein K02F3.5 protein.
          Length = 308

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 28/107 (26%), Positives = 50/107 (46%)
 Frame = +3

Query: 219 WQEARLRCRLEGSVLASPLDAALKSSMLSLITNKKSSCGIYTGIHALFSKGDFRSIEGVP 398
           W  A  +C   G+ LAS + + L+   +  +     +  I  G++ +  +  FR+ +G P
Sbjct: 206 WYTASEKCIGYGAHLAS-IHSRLELGFVQRLVPVNQTAWI--GVNDIQKENVFRNSDGTP 262

Query: 399 LAKIPHDWADYEPDNAGGDSNCILMYPDGNFADVNCTDTFQYVCYKK 539
           +    + W   +PDN   + NC+ +   G + D  C  T  +VC KK
Sbjct: 263 VDF--YKWGKKQPDNQEHNENCVEVDHSGQWTDKLCIITRPFVCKKK 307


>AL031627-2|CAA20953.1|  179|Caenorhabditis elegans Hypothetical
           protein Y102A5C.7 protein.
          Length = 179

 Score = 31.9 bits (69), Expect = 0.65
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +3

Query: 432 EPDNAGGDSNCILMYPDGNFADVNC--TDTFQYVCYK 536
           EP+N GG   C+++   G  +D  C  TD   YVC K
Sbjct: 140 EPNNVGGTEQCLVLTWTGLMSDQTCARTDYVGYVCGK 176


>AL031627-8|CAA20960.2|  222|Caenorhabditis elegans Hypothetical
           protein Y102A5C.17 protein.
          Length = 222

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +3

Query: 432 EPDNAGGDSNCILMYPDGNFADVNC--TDTFQYVCYK 536
           EP+N GG   C+++   G  +D  C  TD   YVC K
Sbjct: 183 EPNNVGGMEQCLVLTWTGLMSDQTCARTDYVGYVCGK 219


>Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical
           protein W04E12.8 protein.
          Length = 321

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
 Frame = +3

Query: 210 PAIWQEARLRCRLEGSVLASPLDAALKSSMLSLITN--KKSSCGIY-TGIHALFSKGDFR 380
           PA ++ A  +C L G  LAS  +    + + S   N  K+S+   Y  G + L + G ++
Sbjct: 40  PAQFEFAEEQCNLLGGHLASVQNGQENALLQSNAANSFKRSNYSDYWIGANDLETSGTWK 99

Query: 381 SIEGVPLAKIPHDWADYEPDNAGGDSNCILMYP-DGNFADVNCTDTFQYVC 530
             +      +  D+++++       S+C +    DG ++ + CT    YVC
Sbjct: 100 WTD----PSVTFDYSNWQLGEPQSGSDCAIQDKGDGTWSAIGCTSYRPYVC 146


>Z81542-2|CAB04416.1|  228|Caenorhabditis elegans Hypothetical
           protein F49A5.3 protein.
          Length = 228

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = +3

Query: 414 HDWADYEPDNAGGDSNCILMYPDG----NFADVNCTDTFQYVC 530
           H++A+  P+N  GD  CI     G    N+A+ +CT+T  +VC
Sbjct: 59  HNFAEDHPNNEYGD--CIYYMTTGTQAGNWANGSCTETMSFVC 99


>U64848-13|AAY86245.1|  339|Caenorhabditis elegans Hypothetical
           protein C50E3.15 protein.
          Length = 339

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +3

Query: 405 KIPHDWADYEPDNAGGDSNCILMY--PDGNFADVNCTDTFQYVCYKKKTSTVAMSSCGSV 578
           K  ++W D EP+  GG   C+ +Y  PD         D   YV + K   +  +   GSV
Sbjct: 153 KAGYNWDDGEPNGIGGRRFCLYLYIEPDIKSEMHGKVDDTAYVAFWKPNESCYLCEWGSV 212


>Z82070-6|CAB04910.1|  321|Caenorhabditis elegans Hypothetical
           protein W04E12.6 protein.
          Length = 321

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
 Frame = +3

Query: 210 PAIWQEARLRCRLEGSVLASPLDAALKSSMLSLITN--KKSSCGIY-TGIHALFSKGDFR 380
           PA +  A  +C L G  LAS  +    + + S   N  K+S+   Y  G   L + G ++
Sbjct: 40  PAQFSFAEQQCNLLGGHLASVQNGQENALLQSNAANSFKRSNYSDYWIGATDLETSGTWK 99

Query: 381 SIEGVPLAKIPHDWADYEPDNAGGDSNCILMYP-DGNFADVNCTDTFQYVC 530
             +      +  D+++++       S+C +    DG ++ + CT    YVC
Sbjct: 100 WTD----PSVTFDYSNWQLGEPQSGSDCAIQDKGDGTWSAIGCTSYRPYVC 146


>AC006663-2|AAF39900.2|  603|Caenorhabditis elegans Hypothetical
           protein H24K24.4 protein.
          Length = 603

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 248 GRICIGFTSGRCFKKQHAV 304
           G IC+GF  GR  K QH V
Sbjct: 200 GEICVGFVGGRFSKNQHFV 218


>Z82260-2|CAB05130.1|  344|Caenorhabditis elegans Hypothetical
           protein C32H11.3 protein.
          Length = 344

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 402 AKIPHDWADYEPDNAGGDSNCILMYPDGN 488
           A+   D+ADY   N GG + CI     GN
Sbjct: 236 AQYTRDYADYVQLNCGGSTTCIATVDGGN 264


>Z81083-2|CAB03101.3|  646|Caenorhabditis elegans Hypothetical
           protein F44F1.3 protein.
          Length = 646

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 330 CGIYTGIHALFSKGDFRSIEGVPLAKIP 413
           CG Y GIH   S   F ++ G P+  IP
Sbjct: 210 CGNYKGIHGFQSLSAFSALTGSPVLLIP 237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,643,211
Number of Sequences: 27780
Number of extensions: 297874
Number of successful extensions: 732
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)