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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_M19
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0782 - 27658855-27659211,27660417-27660540,27660714-27660871    146   2e-35
09_04_0728 - 19771975-19772093,19772131-19772224,19772322-197725...    55   7e-08
09_04_0656 + 19267392-19267432,19267530-19267637,19269114-192691...    52   6e-07
06_01_0285 - 2090427-2090558,2091045-2091119,2091334-2091407,209...    50   2e-06
02_05_0884 - 32483735-32483866,32484417-32484491,32484707-324847...    49   6e-06
06_03_0903 - 25816395-25816493,25816695-25816779,25817390-258174...    47   2e-05
05_01_0588 + 5278013-5278153,5278641-5278782,5278923-5279019,527...    46   3e-05
02_01_0614 - 4599035-4599083,4599209-4599303,4599410-4599494,460...    44   1e-04
06_01_0539 + 3869156-3869908                                           36   0.033
06_01_0529 + 3831100-3831852                                           36   0.033
06_01_0479 + 3419657-3420337                                           36   0.033
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653...    36   0.057
07_03_1256 - 25237465-25237590,25237833-25237918,25238025-252380...    35   0.099
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852...    33   0.30 
08_02_1353 + 26335306-26335448,26336025-26336106,26336322-263364...    32   0.53 
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783...    32   0.53 
06_03_0501 + 21476715-21476785,21477045-21477786,21478097-214782...    29   6.5  
02_04_0622 - 24508508-24508666,24509533-24509634,24510108-245101...    28   8.6  

>03_05_0782 - 27658855-27659211,27660417-27660540,27660714-27660871
          Length = 212

 Score =  146 bits (354), Expect = 2e-35
 Identities = 66/159 (41%), Positives = 103/159 (64%)
 Frame = +1

Query: 103 NEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRNLAE 282
           +E+K+  +    +MG  G+ GD  QF E+I KN+ LY+ RN   L  +A A+FTR  LA 
Sbjct: 31  DEDKVMVLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNIPLSTAATANFTRGELAT 90

Query: 283 YLRSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKD 462
            LR + PY+VNVL+ GYD + G  LY++DY+A+  K+   A GYG Y  LS+MD+ ++ D
Sbjct: 91  ALRKN-PYYVNVLLAGYDSDVGASLYYIDYIATFHKIEKGAFGYGSYFCLSLMDKLYRPD 149

Query: 463 ATETEAYDILKKCVQEVHKRLFVSLPNFQVTVVNRDGIK 579
            +  EA D++ KC++E+  RL V+  NF + +V+++G +
Sbjct: 150 MSVEEAVDLVDKCIKEIRLRLVVAPQNFIIKIVDKEGAR 188


>09_04_0728 -
           19771975-19772093,19772131-19772224,19772322-19772507,
           19772596-19772767,19772854-19772983,19773060-19773136,
           19774109-19774194,19774508-19774585,19775916-19776045,
           19776379-19776423,19776508-19776618,19776801-19777057,
           19777153-19777302,19777899-19778008,19778426-19778546
          Length = 621

 Score = 55.2 bits (127), Expect = 7e-08
 Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
 Frame = +1

Query: 109 EKIYKISDRLVMGVIGDSGDTNQFAEYIAK-NIQLYKMRNGYELGPSAAASFTRRNLAEY 285
           E+I  +    ++G  G+  D  +   Y+ +  +  +   +G  LGP    S+  R +   
Sbjct: 401 ERIKAVGKHSLIGASGEFSDFQEILRYLDELTLSDHMWDDGNSLGPKEVHSYLTRVMYNR 460

Query: 286 LRSSTPYFVNVLMGGYDK-ENGPELYF--MDYLASSVKVPFAAHGYGGYLSLSIMDRYHK 456
                P + ++++GG  K   G E Y   ++ + +  +    A G+G ++++ I+    +
Sbjct: 461 RNKFDPLWNSLVIGGVKKGPKGEEKYLGMVNMIGTHFEENHIATGFGNHMAIPILRTEWR 520

Query: 457 KDATETEAYDILKKCVQEVHKRLFVSLPNFQVTVVNRDGIKVLPTINSASLQ*FSLF 627
           +D T  EA  +++KC+  +  R   S+  FQ+  +  +G  + P  +  +   F+ F
Sbjct: 521 EDMTFEEAVKLVEKCLLVLLYRDRSSINKFQIAKITTEGATIYPPYSLKTYWGFAAF 577


>09_04_0656 +
           19267392-19267432,19267530-19267637,19269114-19269195,
           19269637-19269766,19269882-19270024,19270198-19270284,
           19270384-19270458
          Length = 221

 Score = 52.0 bits (119), Expect = 6e-07
 Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 13/172 (7%)
 Frame = +1

Query: 103 NEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRNLAE 282
           +  KI +++D+  +   G  GD     + +A    LY+ ++   +   A A      L  
Sbjct: 43  DHSKICELADKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTL-- 100

Query: 283 YLRSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHK-- 456
           Y +   PY+   ++GG D E    ++  D + S  +  ++A G G  L + ++D   K  
Sbjct: 101 YYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSALIMPVLDNQLKSP 160

Query: 457 -------KDA----TETEAYDILKKCVQEVHKRLFVSLPNFQVTVVNRDGIK 579
                  +DA    +ETEA D++K       +R   +    ++ V+N+ G K
Sbjct: 161 SPLLLPARDAVTPLSETEAVDLVKDVFASATERDIYTGDKLEIVVINKAGTK 212


>06_01_0285 -
           2090427-2090558,2091045-2091119,2091334-2091407,
           2091792-2091903,2092036-2092108,2092291-2092346,
           2092679-2092755,2093384-2093525
          Length = 246

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 35/156 (22%), Positives = 71/156 (45%)
 Frame = +1

Query: 109 EKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRNLAEYL 288
           +KI +++D + +   G + DT   +EY+   +  + ++ G       AA+  R  L  Y 
Sbjct: 57  DKITQLTDNVYVCRSGSAADTQVISEYVRYFLHQHTIQLGQPATVKVAANLIR--LLAY- 113

Query: 289 RSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKDAT 468
           ++       +++GG+DK  G +++ +    + ++ PFA  G G      ++D   K+  +
Sbjct: 114 QNKNMLQAGMIVGGWDKYEGGQIFSVPLGGTILRQPFAIGGSGSSYLYGLLDHEWKEGMS 173

Query: 469 ETEAYDILKKCVQEVHKRLFVSLPNFQVTVVNRDGI 576
           + EA   + K V     R   S    +   +N DG+
Sbjct: 174 QEEAEKFVVKVVSLAIARDGASGGVVRTVTINADGV 209


>02_05_0884 -
           32483735-32483866,32484417-32484491,32484707-32484780,
           32485180-32485291,32485476-32485548,32485674-32485729,
           32486046-32486122,32486799-32486940
          Length = 246

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 34/156 (21%), Positives = 71/156 (45%)
 Frame = +1

Query: 109 EKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRNLAEYL 288
           +KI +++D + +   G + DT   ++Y+   +  + ++ G       AA+  R  L  Y 
Sbjct: 57  DKITQLTDNVYICRSGSAADTQVISDYVRYFLHQHTIQLGQPATVKVAANLIR--LLAY- 113

Query: 289 RSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKDAT 468
           ++       +++GG+DK  G +++ +    + ++ PFA  G G      ++D   K+  +
Sbjct: 114 QNKNMLQAGMIVGGWDKYEGGQIFSVPLGGTILRQPFAIGGSGSSYLYGLLDHEWKEGMS 173

Query: 469 ETEAYDILKKCVQEVHKRLFVSLPNFQVTVVNRDGI 576
           + EA   + K V     R   S    +   +N DG+
Sbjct: 174 QEEAEKFVVKVVSLAIARDGASGGVVRTVTINADGV 209


>06_03_0903 -
           25816395-25816493,25816695-25816779,25817390-25817479,
           25818566-25818673,25818771-25818952,25819032-25819216,
           25820812-25820971
          Length = 302

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 29/134 (21%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
 Frame = +1

Query: 109 EKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRNLAEYL 288
           ++++KI D+L +G+ G + D     + +    +LY++R   ++ P   AS     L  Y 
Sbjct: 153 QRVFKIHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPQTFASLVSALL--YE 210

Query: 289 RSSTPYFVNVLMGGYDKENGPELYFMDYL-ASSVKVPFAAHGYGGYLSLSIMDRYHKKDA 465
           +   PYF   ++ G  ++N P +  MD + A  +   F   G          +  +K + 
Sbjct: 211 KRFGPYFCQPVIAGLGEDNEPFICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNM 270

Query: 466 TETEAYDILKKCVQ 507
              E ++ + + +Q
Sbjct: 271 EPEELFETISQALQ 284


>05_01_0588 +
           5278013-5278153,5278641-5278782,5278923-5279019,
           5279130-5279199,5279284-5279388,5279531-5279629,
           5280062-5280152,5280238-5280311
          Length = 272

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 30/135 (22%), Positives = 62/135 (45%)
 Frame = +1

Query: 103 NEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRNLAE 282
           N EKI+ ++  +     G + DT    + ++  +QL++   G E     + +  + +L  
Sbjct: 68  NCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYATGRESRVVTSLTLLKSHLFS 127

Query: 283 YLRSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKD 462
           Y    +   V   +GG D   GP L+ +    S+  +PFA  G G   ++S+ +  +K+ 
Sbjct: 128 YQGHVSAALV---LGGVDV-TGPHLHTVYPHGSTDTLPFATMGSGSLAAMSVFESKYKEG 183

Query: 463 ATETEAYDILKKCVQ 507
            T  E   ++ + ++
Sbjct: 184 LTREEGIQLVAEAIR 198


>02_01_0614 -
           4599035-4599083,4599209-4599303,4599410-4599494,
           4600107-4600196,4600772-4600879,4600983-4601197
          Length = 213

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
 Frame = +1

Query: 109 EKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRNLAEYL 288
           ++++KI D+L +G+ G + D     + +    +LY++R   ++ P A AS     L  Y 
Sbjct: 49  QRVFKIHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPQAFASLVSALL--YE 106

Query: 289 RSSTPYFVNVLMGGYDKENGPELYFMDYL-ASSVKVPFAAHGYGGYLSLSIMDRYHKKDA 465
           +   PYF   ++ G    + P +  MD + A  +   F   G          +  +K   
Sbjct: 107 KRFGPYFCQPVIAGLGDNDEPFICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPSM 166

Query: 466 TETEAYDILKKCVQ 507
              E ++ + + +Q
Sbjct: 167 EPEELFETISQALQ 180


>06_01_0539 + 3869156-3869908
          Length = 250

 Score = 36.3 bits (80), Expect = 0.033
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 3/137 (2%)
 Frame = +1

Query: 109 EKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASF---TRRNLA 279
           EK+YKI   L   V G   D N        + Q Y +     +           T++   
Sbjct: 63  EKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYT 122

Query: 280 EYLRSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKK 459
           ++     P+ V+ L  G+DK +G +LY  D   +      AA G     + S++ + ++ 
Sbjct: 123 QF-GGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD 181

Query: 460 DATETEAYDILKKCVQE 510
             T  EA  +  K + +
Sbjct: 182 GMTREEAVALALKVLSK 198


>06_01_0529 + 3831100-3831852
          Length = 250

 Score = 36.3 bits (80), Expect = 0.033
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 3/137 (2%)
 Frame = +1

Query: 109 EKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASF---TRRNLA 279
           EK+YKI   L   V G   D N        + Q Y +     +           T++   
Sbjct: 63  EKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYT 122

Query: 280 EYLRSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKK 459
           ++     P+ V+ L  G+DK +G +LY  D   +      AA G     + S++ + ++ 
Sbjct: 123 QF-GGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD 181

Query: 460 DATETEAYDILKKCVQE 510
             T  EA  +  K + +
Sbjct: 182 GMTREEAVALALKVLSK 198


>06_01_0479 + 3419657-3420337
          Length = 226

 Score = 36.3 bits (80), Expect = 0.033
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 3/137 (2%)
 Frame = +1

Query: 109 EKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASF---TRRNLA 279
           EK+YKI   L   V G   D N        + Q Y +     +           T++   
Sbjct: 39  EKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYT 98

Query: 280 EYLRSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKK 459
           ++     P+ V+ L  G+DK +G +LY  D   +      AA G     + S++ + ++ 
Sbjct: 99  QF-GGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD 157

Query: 460 DATETEAYDILKKCVQE 510
             T  EA  +  K + +
Sbjct: 158 GLTREEAVALALKVLSK 174


>01_06_1091 +
           34464923-34465026,34465124-34465163,34465245-34465328,
           34465457-34465480,34465582-34465655,34465726-34465812,
           34465922-34466006,34466215-34466261,34467048-34467113,
           34468307-34468397,34468477-34468548
          Length = 257

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 21/72 (29%), Positives = 37/72 (51%)
 Frame = +1

Query: 301 PYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKDATETEA 480
           P+   V++GGYD++ GP+LY ++    S K   AA G G   + + +++    + T  E 
Sbjct: 139 PFGCGVILGGYDRD-GPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREG 197

Query: 481 YDILKKCVQEVH 516
              + K +  VH
Sbjct: 198 IVEVAKIIYGVH 209


>07_03_1256 -
           25237465-25237590,25237833-25237918,25238025-25238083,
           25238516-25238612,25239582-25239663,25239752-25240096
          Length = 264

 Score = 34.7 bits (76), Expect = 0.099
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
 Frame = +1

Query: 115 IYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASF--TRRNLAEYL 288
           ++ I+DR+ +   G  GD    A+        ++ + GY++ P   A +   R  +    
Sbjct: 127 LFAITDRIGLLATGMPGDGRAIAQEARNAAAEFRFKWGYKMSPCMLAQWIADRAQIRTQH 186

Query: 289 RSSTPYFVNVLMGGYDKENG-PELYFMD 369
               PY V  ++ G D+E G PEL+  D
Sbjct: 187 AQIRPYGVVSMIFGIDEEKGTPELFTCD 214


>11_06_0394 -
           23084485-23084577,23084677-23084802,23085134-23085236,
           23085895-23085953,23086418-23086519,23086601-23086714,
           23087666-23087746,23088073-23088154,23088504-23088556
          Length = 270

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
 Frame = +1

Query: 109 EKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNG----YELGPSAAASFTRR-N 273
           EKI +I + +   + G   D     E+     Q ++   G     E    A      R  
Sbjct: 78  EKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFG 137

Query: 274 LAEYLRSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGY-LSLSIMDRY 450
             +    S P+ V++L+ G+D ENGP LY+ D   +  +    A G G      S+ ++Y
Sbjct: 138 EGDEESMSRPFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQY 196

Query: 451 HK 456
           +K
Sbjct: 197 NK 198


>08_02_1353 +
           26335306-26335448,26336025-26336106,26336322-26336451,
           26336486-26336548,26336549-26336691,26336827-26336913,
           26337014-26337088
          Length = 240

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 20/86 (23%), Positives = 34/86 (39%)
 Frame = +1

Query: 103 NEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRNLAE 282
           +  KI  ++D+ V+   G  GD       +     LY+  +  ++   A A      L  
Sbjct: 41  DSSKIAHLADKCVLASSGFQGDVKALQRNLTAKELLYEHNHNKKMSCPAMAQLLSNTL-- 98

Query: 283 YLRSSTPYFVNVLMGGYDKENGPELY 360
           Y +   PY+   ++GG D E     Y
Sbjct: 99  YYKRFFPYYAFNVLGGLDSEVAAHQY 124


>05_05_0306 -
           23977543-23977614,23977709-23977799,23978296-23978361,
           23978399-23978479,23979130-23979176,23979408-23979492,
           23979570-23979656,23979728-23979801,23980083-23980166,
           23980259-23980298,23980386-23980489
          Length = 276

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +1

Query: 301 PYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKDATETE 477
           P+   V++GGYD++ GP+LY ++    S K   AA G G   + + +    +KD +  E
Sbjct: 131 PFGCGVILGGYDRD-GPQLYMIEPSGLSYKYFGAALGKGRQAAKTCVYDGSRKDDSAFE 188


>06_03_0501 +
           21476715-21476785,21477045-21477786,21478097-21478246,
           21478350-21478589,21479968-21480048,21480144-21480185,
           21480953-21481033,21481271-21481368,21482574-21482667,
           21482733-21482861,21483881-21483931,21484023-21484049,
           21484280-21484387,21484956-21485201
          Length = 719

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 238 GPSAAASFTRRNLAEYLRSSTPYFVNVL 321
           GPSA  SF R +  EYL SS   +V+ L
Sbjct: 456 GPSAVTSFVRLSAMEYLSSSGKLYVSRL 483


>02_04_0622 -
           24508508-24508666,24509533-24509634,24510108-24510176,
           24510294-24510362,24510428-24510502,24510584-24510688,
           24511309-24511407,24511521-24513230,24513489-24513788,
           24514748-24514846,24514962-24515079,24515166-24515251,
           24515334-24515402,24515746-24515843,24516373-24516534,
           24516779-24516787,24516970-24516991,24517620-24517712,
           24517872-24517940,24518720-24518782,24518882-24519037,
           24520895-24521230
          Length = 1355

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +1

Query: 355 LYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKDATETEAYDILKKCVQEVHKRLFVS 534
           +  ++Y A + ++  A+  Y   +   + D   +  AT    Y +  K   E  +RLF+S
Sbjct: 394 ILILEYWADAPEIQRASDIYEDLIKCCVADAMSEVRATARSCYRMFTKTWPERSRRLFMS 453

Query: 535 L-PNFQVTVVNRDG 573
             P  Q  + + DG
Sbjct: 454 FDPAVQRIINDEDG 467


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,425,681
Number of Sequences: 37544
Number of extensions: 345654
Number of successful extensions: 640
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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