Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_M19
(887 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80442-1|AAB37663.1| 202|Caenorhabditis elegans Proteasome beta... 139 2e-33
Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical pr... 57 2e-08
L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome bet... 42 6e-04
AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome co... 42 6e-04
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 36 0.029
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z77668-3|CAI46576.1| 284|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z77655-9|CAI46567.1| 284|Caenorhabditis elegans Hypothetical pr... 32 0.63
AC006603-1|AAF39749.1| 772|Caenorhabditis elegans Hypothetical ... 31 1.5
Z54270-8|CAA91029.2| 301|Caenorhabditis elegans Hypothetical pr... 29 5.9
U58727-2|AAB00582.2| 462|Caenorhabditis elegans Hypothetical pr... 28 7.8
>U80442-1|AAB37663.1| 202|Caenorhabditis elegans Proteasome beta
subunit protein 4 protein.
Length = 202
Score = 139 bits (337), Expect = 2e-33
Identities = 66/164 (40%), Positives = 104/164 (63%), Gaps = 2/164 (1%)
Frame = +1
Query: 109 EKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRNLAEYL 288
+K Y++ +L M IG+ GD QF ++ +N+QLY +RNGYE+ PS A F RR++AE L
Sbjct: 37 DKEYRLGKKLTMMCIGEEGDVAQFGDWTKRNLQLYSVRNGYEVSPSCAHHFVRRSIAEGL 96
Query: 289 RSSTPYFVNVLMGGY-DKENGPELYFMDYLASSV-KVPFAAHGYGGYLSLSIMDRYHKKD 462
RS Y V+VL+GGY DKE+ L +DYLA+ + + P+ G+ G +IMDR +KKD
Sbjct: 97 RSQDHYTVDVLIGGYDDKEDKAFLGSVDYLANGLGQQPYLFRGFCGRFCYAIMDREYKKD 156
Query: 463 ATETEAYDILKKCVQEVHKRLFVSLPNFQVTVVNRDGIKVLPTI 594
TE E ++ KC+ E +R ++P ++V ++++ G + L +
Sbjct: 157 MTEAEGLALMNKCIGEAKRRFVANIPGYKVVIIDKKGYRKLDDV 200
>Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical
protein C47B2.4 protein.
Length = 277
Score = 62.1 bits (144), Expect = 5e-10
Identities = 34/133 (25%), Positives = 70/133 (52%)
Frame = +1
Query: 109 EKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRNLAEYL 288
EK++K+++ + G + D +Q + ++ N++L ++ G + A +++L Y
Sbjct: 78 EKVHKLTESIYACGAGTAADLDQVTKMLSGNLRLLELNTGRKARVITALRQAKQHLFNYQ 137
Query: 289 RSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKDAT 468
Y +L+GG D GP LY +++ PF A G G Y +++I++R K D T
Sbjct: 138 GYIGAY---LLIGGVDP-TGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKVDMT 193
Query: 469 ETEAYDILKKCVQ 507
+ EA ++++ ++
Sbjct: 194 KDEAEKLVQRALE 206
>Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical
protein K05C4.1 protein.
Length = 284
Score = 56.8 bits (131), Expect = 2e-08
Identities = 37/136 (27%), Positives = 65/136 (47%)
Frame = +1
Query: 73 AAQAE*LS*LNEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAA 252
A+ E +S + KI I DR+V + G + D + +AK LY++R + SAA
Sbjct: 91 ASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREKTSITVSAA 150
Query: 253 ASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSL 432
+ + L Y V ++ GYDK+ GP+++ +D ++ + G G +
Sbjct: 151 SKYFANTLYGYRGQGLS--VGSMVAGYDKK-GPQIFKVDSEGDRCQLKVCSVGSGSLNAY 207
Query: 433 SIMDRYHKKDATETEA 480
I+D ++K T+ EA
Sbjct: 208 GILDNHYKPKMTDDEA 223
>L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome beta
subunit protein 6 protein.
Length = 258
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/112 (20%), Positives = 48/112 (42%)
Frame = +1
Query: 109 EKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRNLAEYL 288
EKI ++D +++ G GD Q + + + Y+ ++ A RNL Y
Sbjct: 84 EKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNL--YY 141
Query: 289 RSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMD 444
R PY+ ++ G D+ ++ D + ++ ++A G + + +D
Sbjct: 142 RRFFPYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLD 193
>AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome
component C5 protein.
Length = 258
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/112 (20%), Positives = 48/112 (42%)
Frame = +1
Query: 109 EKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRNLAEYL 288
EKI ++D +++ G GD Q + + + Y+ ++ A RNL Y
Sbjct: 84 EKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNL--YY 141
Query: 289 RSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMD 444
R PY+ ++ G D+ ++ D + ++ ++A G + + +D
Sbjct: 142 RRFFPYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLD 193
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 36.3 bits (80), Expect = 0.029
Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 5/169 (2%)
Frame = +1
Query: 109 EKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRNLAEY- 285
EK+Y++SD + V G + D N ++ Y+ G E+ Y
Sbjct: 63 EKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYT 122
Query: 286 -LRSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKD 462
+ P+ V++L G+DK G +LY D + G +++++ + +K
Sbjct: 123 QIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSP 182
Query: 463 ATETEAYDILKKCVQEVHKRLFVSLPNFQV---TVVNRDGIKVLPTINS 600
E EA + ++ + K L V L + +V + RDG VL + +
Sbjct: 183 NLE-EAKQL---AIKVLWKTLDVKLASEKVEMAVLTRRDGKTVLEELTT 227
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 34.3 bits (75), Expect = 0.12
Identities = 37/160 (23%), Positives = 67/160 (41%), Gaps = 5/160 (3%)
Frame = +1
Query: 115 IYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRNLAEYLRS 294
+Y+IS + IG D + +K +NGY++ P + +L +Y
Sbjct: 69 VYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDM-PCELLAKKMADLNQYYTQ 127
Query: 295 STPYF---VNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKK-- 459
+ +L YD E GPE+Y +D + + G + S +++ KK
Sbjct: 128 NAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKS 187
Query: 460 DATETEAYDILKKCVQEVHKRLFVSLPNFQVTVVNRDGIK 579
+ T TEA ++ + +Q + V + +V VV +D K
Sbjct: 188 ELTSTEAIELAIEALQ-TSLGIDVRSKDLEVVVVTKDNSK 226
>Z77668-3|CAI46576.1| 284|Caenorhabditis elegans Hypothetical
protein R11G10.3 protein.
Length = 284
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -3
Query: 531 NKQSFVNFLNTLLKDVICLCFCSIFFMVTIHNTQT*ISTITMSCKWYL 388
+++SFVN + L VICLC + F+V + T + T++ ++ L
Sbjct: 149 HEESFVNNIQVALSFVICLCLV-VLFLVNRYKTANSVGKSTLTTRYQL 195
>Z77655-9|CAI46567.1| 284|Caenorhabditis elegans Hypothetical
protein R11G10.3 protein.
Length = 284
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -3
Query: 531 NKQSFVNFLNTLLKDVICLCFCSIFFMVTIHNTQT*ISTITMSCKWYL 388
+++SFVN + L VICLC + F+V + T + T++ ++ L
Sbjct: 149 HEESFVNNIQVALSFVICLCLV-VLFLVNRYKTANSVGKSTLTTRYQL 195
>AC006603-1|AAF39749.1| 772|Caenorhabditis elegans Hypothetical
protein B0524.4 protein.
Length = 772
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 412 YGGYLSLSIMDRYHKKDATETEAYDILKKCVQEVHKRLFVSLPNFQVTVVNRDGIKVLPT 591
+ GYL+ + + HK T +A+DILK ++ + K F + + + VLP
Sbjct: 187 FNGYLNAMTLLKKHKDQDTIEKAFDILKASIRAMQKLNFKDVEKYTTDASLKTLDSVLPE 246
Query: 592 I 594
+
Sbjct: 247 L 247
>Z54270-8|CAA91029.2| 301|Caenorhabditis elegans Hypothetical
protein F11C1.4 protein.
Length = 301
Score = 28.7 bits (61), Expect = 5.9
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Frame = +1
Query: 139 VMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRN---LAEYLRSSTPYF 309
V+G G+ G F + +N+ + R G + + N L LR S +
Sbjct: 24 VLGNPGNDGFYTDFGRRLIRNLIAREERLGTRRVQFVFYTLSHLNHVLLPTSLRCSESHK 83
Query: 310 VNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKD 462
VN D+ + +YL +V HG G Y+ LSI+ Y K D
Sbjct: 84 VNERFSLADQVQHKLDFVKEYLPRGNRVYMFGHGDGAYMLLSILP-YIKDD 133
>U58727-2|AAB00582.2| 462|Caenorhabditis elegans Hypothetical
protein D1005.2 protein.
Length = 462
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 436 YSNLDIHHNHELQMVPSRLMLNSP*NTVQVHFLYHNHP 323
+S +HHNHEL P + S N+V+V L HP
Sbjct: 372 HSTFKVHHNHELGAPPVISLDPSIYNSVEVVDLKFPHP 409
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,194,213
Number of Sequences: 27780
Number of extensions: 318852
Number of successful extensions: 741
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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