Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_M16
(901 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 25 0.71
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.94
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.94
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 25 0.94
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 25 0.94
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 24 2.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.8
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 23 3.8
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 5.0
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 8.8
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 25.4 bits (53), Expect = 0.71
Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +3
Query: 801 RYMHLVVI-LILWLASLVVILGTNAGILL 884
+Y+ +V+ L LW+ +L V++GT AGI+L
Sbjct: 507 KYVAMVLDRLFLWIFTLAVVVGT-AGIIL 534
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.0 bits (52), Expect = 0.94
Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +3
Query: 801 RYMHLVVI-LILWLASLVVILGTNAGILL 884
+Y+ +V+ L LW+ +L V++GT AGI+L
Sbjct: 512 KYVAMVLDRLFLWIFTLAVLVGT-AGIIL 539
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.0 bits (52), Expect = 0.94
Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +3
Query: 801 RYMHLVVI-LILWLASLVVILGTNAGILL 884
+Y+ +V+ L LW+ +L V++GT AGI+L
Sbjct: 512 KYVAMVLDRLFLWIFTLAVLVGT-AGIIL 539
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 25.0 bits (52), Expect = 0.94
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 871 AFVPRMTTKLASHRIRITTRCIYLKLTFNIRLV 773
AFVP +H +ITT C+ + L+ + LV
Sbjct: 721 AFVPIYFGTGNAHETQITTLCVAISLSATVTLV 753
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 25.0 bits (52), Expect = 0.94
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 871 AFVPRMTTKLASHRIRITTRCIYLKLTFNIRLV 773
AFVP +H +ITT C+ + L+ + LV
Sbjct: 811 AFVPIYFGTGNAHETQITTLCVAISLSATVTLV 843
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 23.8 bits (49), Expect = 2.2
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +2
Query: 233 TTSRNMTGLLIIKCLTWSRNSLXYFRNMINEGVTYEILNLYENTFPTLTEKYFENTP 403
TT + L ++ L+ N NEG I N +N+F LT F + P
Sbjct: 177 TTEKGALVTLSVQLLSCEVNGSTLVYIGDNEGFALIIYNNSDNSFQRLTSSTFASDP 233
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.0 bits (47), Expect = 3.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 755 VLHSLVDKSNIKRQLEVYASGGD 823
+LH L +N Q+ + SGGD
Sbjct: 1142 ILHGLKKYTNYSMQVLAFTSGGD 1164
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 23.0 bits (47), Expect = 3.8
Identities = 15/66 (22%), Positives = 29/66 (43%)
Frame = -1
Query: 265 NKKTCHIPARSVLWTVLHSRHRIRNLPHYNRRWNTWLLIESNSIHTLEFMRLNEYLVSRI 86
NKKT H+ ++H+ + L NR++ + +S + + L R+
Sbjct: 62 NKKTRHMLPTGFRKVLVHNVKELEVLMMQNRKFCAEIAHGGSSKKRKSIVERAQQLSIRV 121
Query: 85 TYSAIR 68
TY++ R
Sbjct: 122 TYASAR 127
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.6 bits (46), Expect = 5.0
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 290 NSLXYFRNMINEGVTYE--ILNLYENTFPT 373
N L + N +N+GVTY+ I+ + N T
Sbjct: 54 NELNFNLNYVNKGVTYKHTIIEMDSNPIKT 83
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 8.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 462 YTKNYTTATSMQESLEDQN 518
Y KNYT S ++ L QN
Sbjct: 446 YNKNYTKFCSTEKRLTKQN 464
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,115
Number of Sequences: 438
Number of extensions: 5503
Number of successful extensions: 32
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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