Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_M07
         (900 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0058 + 438000-438230,438847-438902,440003-440117,440314-44...    30   2.2  
09_04_0385 + 17167174-17167440,17173321-17173962                       30   2.2  
02_05_0516 + 29694631-29695182                                         30   2.2  
01_03_0045 + 11929624-11929890,11930500-11930551,11932683-119331...    29   3.8  
03_04_0044 + 16754638-16754676,16755472-16755598,16756325-167564...    28   8.8  

>11_01_0058 +
           438000-438230,438847-438902,440003-440117,440314-440424,
           442331-442518,442957-443013,443109-443268,443368-443436,
           443580-443699
          Length = 368

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = +1

Query: 172 GDYPKEYNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGA 330
           GD+   Y P     Y P  Y+G+P  P + L+   +G        TPS V  A
Sbjct: 15  GDHYPYYKPTSRPHYQPPHYHGQPAAPPAPLQQQHLGP----HGVTPSTVGVA 63


>09_04_0385 + 17167174-17167440,17173321-17173962
          Length = 302

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 357 LPSPPGSTESSGHGRRSLAAATEPRTD 277
           LP  P +T SSG+ R S +A++ PR D
Sbjct: 146 LPPEPSATTSSGNDRSSSSASSPPRAD 172


>02_05_0516 + 29694631-29695182
          Length = 183

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = +1

Query: 286 WFGRRSKT-PS--AVAGAFSRAWWRWQHKYVQPKKVGMA 393
           W  RRSK+ PS  A AG   + WW W   ++  KK G A
Sbjct: 67  WAFRRSKSAPSLGAFAGGPLKRWWDWGVGWLMSKKPGFA 105


>01_03_0045 +
           11929624-11929890,11930500-11930551,11932683-11933103,
           11933574-11934162
          Length = 442

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -1

Query: 285 RTDFVQLQLAEWSIRFSIVACRIVRPMYSRIILLGVITESHIFRKARCTFLKISSS 118
           R+DF  + +   + R   VACR++    +R++ L +   +   RKAR T  K+  S
Sbjct: 304 RSDFRLIAIDLVASRSRQVACRLLSRRTTRVLCLAISLSNATHRKARATPPKVFES 359


>03_04_0044 +
           16754638-16754676,16755472-16755598,16756325-16756451,
           16756866-16757431,16757896-16758211,16758373-16758613,
           16758734-16758823,16759343-16759780,16759877-16760185,
           16760392-16760406
          Length = 755

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
 Frame = +1

Query: 112 VPTRTDF*KSASGFSKNMAFGDYPKEYNPA--VH---GPYDPARYYGKPDTPFSQLKLNE 276
           VPT T   ++AS   ++ + G   K   P+   H    P   ++Y+ KP+TP    K+N 
Sbjct: 230 VPTSTATKENASNGQQSRSSGVSSKNSRPSSSTHLSSRPSSSSQYHSKPNTPVGHPKVNP 289

Query: 277 IGSWFGRRSKTPS 315
              W   +S +PS
Sbjct: 290 QLEW-KPKSVSPS 301


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,916,712
Number of Sequences: 37544
Number of extensions: 356010
Number of successful extensions: 1045
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)